Nicotiana attenuata (coyote tobacco): 109223281
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Entry
109223281 CDS
T05870
Name
(RefSeq) DNA polymerase delta small subunit isoform X1
KO
K02328
DNA polymerase delta subunit 2
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03030
DNA replication
nau03410
Base excision repair
nau03420
Nucleotide excision repair
nau03430
Mismatch repair
nau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109223281
03410 Base excision repair
109223281
03420 Nucleotide excision repair
109223281
03430 Mismatch repair
109223281
03440 Homologous recombination
109223281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nau03032
]
109223281
03400 DNA repair and recombination proteins [BR:
nau03400
]
109223281
DNA replication proteins [BR:
nau03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
109223281
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
109223281
MMR (mismatch excision repair)
DNA polymerase delta complex
109223281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
109223281
NCBI-ProteinID:
XP_019243075
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Position
3:complement(8956365..8975812)
Genome browser
AA seq
444 aa
AA seq
DB search
MVAAMEVDSESNLLQRKQSLYHSLDESFDIGKEVYRGQQYSQIYYARLHLMRTLLYSLIP
NWKPHLPVRTVLGLEEGKECIIVGTLYKHMKLKPSVLDEYSKERSSAPLVQRHNFTHPDD
NLVLEDESGRVKLSGSVLLPSICVTGMIAALHGKETSAGDFLVEDVLEAGLPQQIERPID
LGEDKYVVFISGLSVGKSSSSPLQFQLFVDHITGHLGDAKEQNIAAQIVQVVIAGNSVEV
PHGLLNGQNLGSKDQSRLFEPIKELDILLTQIAASIPLDIMPGSSDPANFALPQQPLHRC
LFPGSSAYNTFRSCTNPHCFELDNIRFVGTSGQNIDDLGKYSEANSSIEFMERTLRWRHL
APTAPNTLGCYPFTDKDPFYVETCPHVYFVGNQDKFETRLIKGSEGQMVRLICIPGFADT
GMAVVLNIRNLECHTLSFATQIYS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagcaatggaagtggactcagagagcaaccttctccagcgaaaacagtccctc
taccattctttggatgagagttttgatatagggaaggaggtatacaggggacagcagtac
agtcaaatatattatgctaggctccatttgatgcgtactctcctttactctctcattccc
aattggaaaccccatttgcctgtccgtactgttctgggattagaggaaggcaaagaatgc
attatagttgggacactctacaagcacatgaagctaaaaccttctgttctcgatgagtac
tctaaagagagatcttctgcaccgcttgtacaacgtcataactttacgcacccagatgat
aatttagttctggaagacgagagcggaagagtcaaactaagtgggtctgttcttttgcca
tctatatgtgtaacaggtatgattgctgcattgcatggaaaagaaactagtgctggtgat
tttttagttgaagatgttctagaggctggtctaccacagcaaatagagcgaccaattgac
ttaggtgaagataaatatgtggttttcatatctggtttgagtgttgggaaaagctcttct
agtcctctccaatttcaactttttgttgatcacatcactggacatttaggagacgcaaag
gaacaaaatattgcagctcaaatagttcaagttgttattgctggaaactctgttgaagta
cctcatggacttctcaatggacagaatctgggttcaaaggaccagtctagattgtttgag
ccaattaaagagcttgatattttgttgacgcagattgcagcaagtatacctttggatatc
atgccagggtccagtgatccagcaaatttcgccctgccacagcagcctctccatagatgc
ctgttccctggatcatcagcgtataacactttcagatcttgcacaaatccacattgcttt
gaacttgacaacatcaggttcgtaggtacatctggtcaaaatattgatgatcttggcaag
tattctgaggcaaacagtagtattgaatttatggagaggacattgaggtggagacatcta
gcaccaacagcaccaaacacccttgggtgctatcctttcactgataaggatcctttctat
gttgaaacctgtcctcatgtttattttgtgggcaatcaagataaatttgaaactcgcttg
ataaaaggatcagaagggcagatggtaaggcttatttgcattcccggatttgcagatact
ggaatggcagtggtgttgaatataagaaaccttgagtgccatacgctcagctttgctact
caaatctactcataa
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