Nicotiana attenuata (coyote tobacco): 109223297
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Entry
109223297 CDS
T05870
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nau01002
]
109223297
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109223297
Enzymes [BR:
nau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109223297
Peptidases and inhibitors [BR:
nau01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109223297
Ubiquitin system [BR:
nau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109223297
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
109223297
NCBI-ProteinID:
XP_019243099
UniProt:
A0A1J6IHP0
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All DBs
Position
3:10169757..10180222
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AA seq
1178 aa
AA seq
DB search
MLVGGDLGFLSSLVVAAFVAVFGPVLGFVVRRKWRRSVARREEIKRLLVLASEEAARAEL
LAAEEYGYGYGGYSCDYLKDDDVFVEQPVSSAPPPPPPSSTTTSYSGARQLQYQCAVCSS
PTSTRCSQCKAVRYCSGKCQILHWRQGHKDECRPVSNSDHHNDVDATSHLNAYKQESDGS
HLKSIEVEGRHSSESGDASPAEAAVLRSKHSAAYDGKDVRDEQSLTEAKCPNLNSSYVLH
SSQCEHLDLTASSESSVDLSASDSNDSDASDSRKSAVIAKVKSQTNHSKVDGCKPPYREQ
PKLVSAADVVSTSGKYNPTKLSIHGDAQAKYWTSTSSSNDGSSETSSTEPSTPSSGFWEG
AVPYTRSKIQSLDSIAYSASRNACNTKISDSQSTSSQPPEMARPLVSEVGEQGSNSKKNL
KNPNPITVELRKPVNRAESRFEVKDETESRRSSAPLSVTSNQLDVHDSSDKCTSTSEEGR
YSSSGASGNLKNHDGLKVSSLPFSSPNKSYCAVEGSTNVLQLPKDGQKESSPAKISGSHI
SSSNGRHEVQNIKSAKIDSTQVSSACSAESNVPLPNARNGLKSSVLKVVDQFRVSKLTRH
NSLGDECEVVGRYGNKGLFPYDSFVKLHNWKNELRPFGLVNCGNSCYANAVLQCLAFTPP
LTSYFLQGLHSKTCEKKGWCFTCEFESLVLKAKDGNSPLSPISIISHLESIGSNLGNGRE
EDAHEFLRYVIDTMQSICLREAGVSASGSFEEETTLVGLMFGGYLRSKIECMRCGGKSER
QERMMDLTVEIDGDIGTLEEALKQFTHTETLDGENKYRCGRCKSYEKAKKKLKVLEAPNI
LTIALKRFQSGKFGKLNKTIKFPEILNLAPYMSGTSDKSPVYQLYGVVVHLDVMNAAFSG
HYVCYVRNFQNRWFKVDDSSVKPVELERVLSKGAYMLLYSRCSPRAPRIMRSLAVPRDPR
RSKQLACKSRSHTRSPWDSSHGDSTDQTCSECSYTNSHTSVRPSRSIFEDDSSSEQSSSL
FSEGASCSTESTNRDSTSTDELFDQIFGESGGCWNNPWRNSSDSDTSSSSSSPSPLYSRH
SPLADLDRYASAHEETCSSCSDSAETAGDGHGFWSGLPDRNGYAGVRESNSRTALCPNSS
KHCRNLVSSHSSSKTDSSRLGRVNPSDNSKSPATCRDR
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgggaggggatctagggtttctctcgagcttggtggtggcggcttttgtggct
gtttttggaccggtgttaggttttgtggttcgccgaaaatggaggcgttcggtggccagg
agggaggagatcaagaggcttttggttttggcttcggaggaggcagctagggctgagcta
ttggccgctgaagaatacggctacggttatggaggatatagttgtgattatctgaaggat
gatgatgtattcgttgaacagccagtgtcatcagcaccaccaccaccaccaccatcatca
actacaacatcatattctggtgcacggcaattacagtaccaatgtgcagtttgctcttct
cctacctctactcggtgttctcaatgtaaagcagttcgctactgctctggcaaatgtcaa
atccttcattggagacaaggtcacaaggatgaatgccgtccagttagcaactcggatcat
cacaatgatgttgatgcgacatctcatctgaatgcatataagcaggaatcagatggaagt
catcttaagagcattgaggttgaagggagacattcttcagaatcaggcgatgcttcccca
gcagaagctgcagttttgagatccaaacactctgcagcatatgatgggaaggatgtcaga
gatgaacagagtctgacagaagcaaaatgtcccaatttgaactccagttacgtgcttcac
tcatctcaatgtgaacatttggacctcactgcctcaagtgaatcgtctgttgatctttct
gcttctgattcaaatgactctgatgcttctgacagtcgtaagtctgctgttattgctaaa
gttaagagtcagactaatcattccaaggtagacggatgtaagccaccctacagagagcaa
cccaaactggtatctgctgcagatgttgtttcaacgtctggcaaatataatcccaccaag
cttagcattcatggggacgctcaggctaaatattggacatcgacaagttcaagtaatgat
ggctccagtgaaacttcatcaacagagccttctacaccctcatctggtttttgggaagga
gcagttccttatactagatctaagattcagtcacttgacagtattgcatattctgcttcc
agaaatgcttgcaacaccaagatatcagattctcaatcaacttcatctcagccccctgaa
atggctagacctcttgtttctgaggtgggcgaacaaggatccaactcaaaaaagaatctg
aaaaatccaaacccaattacagtggaactgcggaaaccagtcaatcgagctgaatcaaga
ttcgaagttaaagatgagacagaaagcaggaggtcatcagctccactatctgtaacttcg
aatcagcttgatgtgcatgactccagtgataaatgcacatcgacctccgaggaaggtaga
tactcctcatctggtgcttctggtaatttaaagaatcatgatgggttaaaagttagtagc
ttgccattttcaagccccaacaaatcatattgtgctgttgaaggctcgaccaatgtttta
caattgccaaaagatggacaaaaagaatcttctcctgccaaaatttctggtagtcatatc
tcttctagcaatgggaggcatgaagttcaaaatattaagtctgcaaagattgatagcact
caagtgtctagtgcctgttctgctgagtctaatgttcctttaccaaatgcaaggaatggc
ttgaagtcatcggtgttgaaagttgttgaccagttcagggtttcaaagctgacacgacat
aattctttgggggatgagtgtgaggtcgttggaagatatggtaacaagggtctttttcca
tatgacagttttgtgaagcttcataattggaagaatgaattgcggccatttggcctcgta
aactgtggtaacagctgctatgctaatgctgtccttcaatgcttggcgtttactccaccg
cttacttcctattttcttcaagggctccactccaaaacatgtgaaaagaaagggtggtgc
ttcacgtgtgagttcgagagtctagttctaaaagcaaaggacggaaactctcctctctct
cctattagcataatttcccatctcgagagcatcggaagcaatcttggtaatggtagagaa
gaagatgcgcatgaattccttaggtatgttatcgacacaatgcaatccatttgcttgagg
gaagctggggttagtgcatctggctcttttgaagaagaaacaactctggtggggcttatg
tttgggggataccttcgttcaaagatcgagtgcatgaggtgcgggggcaaatctgaaagg
caagagagaatgatggatcttactgttgaaatagacggagatataggtaccttggaggaa
gctttaaaacaatttactcatactgagactctagacggtgaaaacaagtaccgatgtggc
agatgtaaatcatatgaaaaggccaagaaaaagttgaaagtgctggaggctcctaatatc
ctcactattgcattaaagagatttcagtcaggtaaatttgggaagctaaacaagacaatt
aaatttccagagattctgaacctggcaccatatatgagtgggacaagtgataagtcgcca
gtttaccagctttatggagtcgtggttcacctggacgtaatgaatgctgcattttctggt
cactatgtgtgttatgtgaggaactttcagaataggtggttcaaagttgatgatagttcg
gtaaaacctgtggaacttgaaagagtcttgtcgaagggagcatacatgcttctctattca
aggtgctcgccacgggctccgagaataatgaggagtttggcagttcctcgtgatccaaga
agatctaagcaattggcttgtaaatcaagatcccatacaagaagtccatgggactcttct
catggcgattcaactgatcaaacttgcagcgaatgctcttataccaacagtcatacgagt
gtcaggccaagtaggtcaatatttgaggacgactcatcaagcgaacagtcatcctctctc
ttctccgagggtgcttcttgcagcacagagagcactaacagggattctactagcactgat
gaattatttgatcaaatatttggcgagtctggaggctgttggaataacccgtggaggaat
tcatcagattctgacacatcctcatcctcatcttctccttcccctctatactcgagacat
tcaccccttgctgatttggaccgttatgcttctgcacatgaagagacctgtagcagttgt
agcgacagtgcagaaacagctggggatggtcacggtttttggtcagggttacctgatcga
aacggttatgctggggttcgagaaagcaattcaaggacagctctctgccccaactcaagt
aagcattgtagaaatttagttagtagtcatagtagtagtaagaccgactccagtagatta
ggtcgggttaacccttctgacaactcgaaatctcctgcaacttgtagagatcgatga
DBGET
integrated database retrieval system
