Nicotiana attenuata (coyote tobacco): 109223354
Help
Entry
109223354 CDS
T05870
Name
(RefSeq) probable sphingolipid transporter spinster homolog 2
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nau02000
]
109223354
Transporters [BR:
nau02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
109223354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
OATP
Sugar_tr
MFS_3
ORC5_C
Motif
Other DBs
NCBI-GeneID:
109223354
NCBI-ProteinID:
XP_019243179
UniProt:
A0A1J6IHA0
LinkDB
All DBs
Position
3:17180006..17196844
Genome browser
AA seq
534 aa
AA seq
DB search
MGEKEPNLKSLDDSMPKSPSSVAAPAKTDMAKASISSALAPQPSWFTAKRLLAIFCVINL
LNYVDRGTIASNGVNGKRSECTKSGACSSGSGIQGDFNLNNFQDGVISSAFMVGLLVASP
IFASLAKSVNPFRLIGVGLTVWTFATAGCGLSIDFWSITICRMLVGVGEASFISLAAPFI
DDNAPVDQKTAWLGIFYMCIPTGIAVGYVYGGLVGSHLDWRWAFWIEALLMLPFAILGFV
MKPLQLKGFSHTGSQKPVTSTQTSCPEAVASTSIDGSYPTRNDSKDDSKSAPRILNQLTR
FWKDMKVLLLEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYYIYHMNNADLMFGGITIVCG
IFGTLAGGFVLDRMTSTISNAFKLISVATFFGAIFCVAAFCFKSLYAFIALFAIGELLVF
ATQGPVNYVCLHCVKPSLRPLSMAMSTVSIHIFGDVPSSPLVGVLQDHINNWRATALILT
SVLFLASGIWFIGIFLHSVDRYNEENEHQVSIADRSNTIPLLEEKSAETSPSLC
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgggagagaaagagccaaatctaaagtctttggatgattcaatgcctaaaagcccgtca
tcagtggctgctcctgcaaaaacagacatggccaaagcttcaatttcatcagcattagct
cctcaaccttcttggttcactgccaaaaggttactggccatattctgtgtgatcaacttg
ttaaattatgtggatcgtggaactattgcaagcaacggtgttaatgggaaacgtagtgag
tgtactaagagcggtgcatgctcttctggcagtggaatccagggtgattttaacttgaac
aattttcaggatggtgttatatcatctgctttcatggttgggcttctcgtggcatctcca
atatttgcctccttagccaagagtgttaatccatttagacttattggagtgggactgaca
gtctggacctttgctactgctggttgtggcctgtcaattgatttctggtccattaccata
tgcagaatgctggtcggtgttggtgaggcatctttcataagccttgctgctccattcatt
gatgacaatgccccagttgatcagaaaacagcatggctgggaatattttacatgtgcatc
ccaactgggattgctgttggctatgtatatggtggattggttggaagtcatcttgattgg
cgttgggcattctggatagaggcattgctgatgcttccttttgcaattttaggttttgtg
atgaaaccgttgcaattgaaagggttctcgcacacgggatcacaaaaaccagtgacttct
acgcagacttcttgcccagaagcagttgcttcaactagtatagatggttcatacccaaca
agaaatgattccaaggatgattcaaaaagtgcacccagaattttgaatcagttgacaaga
ttttggaaggatatgaaggtgcttttgcttgaaaaggtctacgttgtgaatgtcctagga
tacatagcatataattttgtaataggtgcttattcatactggggaccaaaggctggctat
tacatataccatatgaacaatgcagatctgatgtttggaggtattactatcgtatgtgga
atatttggaaccttagcaggaggctttgttctggatcgaatgacttccacaatatccaat
gcctttaagcttatttcagtggcaacattttttggagcgatattttgcgttgctgccttt
tgttttaagagcttgtatgccttcattgctctttttgcaattggagaactgcttgtattt
gccacgcagggccctgtaaattatgtctgtctgcattgcgtcaaaccaagtttgagacca
ttgtctatggctatgtccactgtttcgattcacatatttggtgatgtgccttcctctcct
ctggtgggcgttctccaggatcacattaacaattggagggctactgctctaatcctgaca
tcagtactgtttctagcctctggaatatggtttataggtatctttcttcatagtgttgat
agatataatgaagaaaatgagcatcaagttagtattgctgatagatcaaacacaattcca
cttcttgaggagaaatctgctgaaacaagtccaagtctctgctga
DBGET
integrated database retrieval system
