Nicotiana attenuata (coyote tobacco): 109223511
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Entry
109223511 CDS
T05870
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like isoform X1
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nau03110
]
109223511
Chaperones and folding catalysts [BR:
nau03110
]
Heat shock proteins
HSP100
109223511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
AAA_14
AAA_18
NACHT
AAA_28
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
AAA_23
Motif
Other DBs
NCBI-GeneID:
109223511
NCBI-ProteinID:
XP_019243403
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All DBs
Position
3:34433961..34441509
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AA seq
927 aa
AA seq
DB search
MRSIMARALVQSTNIPSSVAGERTRQFSGSGKNKKTVKMLCNVQSSSIRLTNFTGLRGCN
AIDTLVKSGQTLHSKVAAATSVRRPKGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHN
FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR
VLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESN
EAVGASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNP
CLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL
MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI
EKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALEAAAQLSYQYISD
RFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD
REMDLKAQISALIDKNKEMSKAESEAGDTGPLVTEADIQHIVSSWTGIPVEKVSTDESDR
LLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL
AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE
IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY
DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLK
NKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVD
VDSDGNVTVLNGTSGTPSDAAPEPIPV
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccatcatggctagagctttagttcagtcaaccaacatcccatcttcagttgcc
ggtgaaaggactaggcaatttagtggatctgggaaaaacaaaaaaactgttaaaatgcta
tgtaatgtacaatcatcctccataaggttgaccaattttacaggactgcgagggtgcaat
gcaatagatacacttgtaaaatctggacaaactctccattcaaaagtggcagctgcaact
tctgtcagacggccaaaaggttgccgatttgtcccaaaagcaatgtttgagcgcttcacc
gagaaagcaattaaagtcattatgcttgcacaagaagaggccagacgactaggtcataac
ttcgttggcacagagcagattttgttgggtcttattggtgagggaactggtattgcagct
aaagttcttaaatccatgggcatcaatttaaaagatgctcgtgtggaggtggagaagata
attggaaggggtagtgggtttgttgctgttgagattccatttactcctcgtgcaaagcgt
gttcttgaactctccctggaggaagcccgccaactagggcataactacattggctcggaa
cacttgctacttgggttgctccgtgaaggtgaaggtgtggctgcccgtgttcttgagaac
ttgggtgctgaccccagtaacattcgcacacaggtcattcgaatggttggcgagagtaat
gaggctgttggtgctagtgttggtggtggaacttctggacaaaagatgcctacattggag
gagtacggcaccaatttgacaaagttagctgaagaggggaaactggatcctgttgttgga
agacagccgcaaattgagcgcgttactcaaatcttgggtcggcgtacaaaaaacaaccct
tgccttattggagaaccaggtgttggcaaaactgctattgctgaaggtttagctcaaaga
attgctagtggcgatgtccctgaaacaatagagggaaagaaggtcataaccctagatatg
ggtttgcttgttgctgggacaaaataccgtggagagtttgaggaaagactgaagaaacta
atggaagaaattaaacaaagtgatgaaataatactctttattgatgaagtgcacacattg
attggagctggagctgcagagggggcaattgatgctgcaaacatcttgaaacctgcctta
gctagaggggaactacagtgtattggagccacaaccctggatgagtacagaaagcacatt
gagaaagatcctgcgttggagaggagattccagccagttaaagtccctgaacctactgtg
gatgaaaccatacagatcttgaaagggcttcgggagagatatgagattcatcacaagctc
cgttacaccgatgaggcattagaagctgctgcccagctttcttatcagtacatcagtgac
cgttttctgcctgataaagcaattgatttgattgatgaagctggttctcgtgttagactt
cgccatgcacagctccctgaggaagcaagagagctcgagaaagaacttcgtcagattaca
aaggagaaaaatgaagccgttcgcggtcaagattttgaaaaggctggggaattgcgtgat
agagaaatggatcttaaggcacagatctcagccctgatagacaaaaacaaagagatgagc
aaggctgaatctgaggctggagatacaggtccactcgttacagaggcagatattcagcac
attgtgtcttcatggactggcatccctgttgagaaggtttctacagatgagtctgatcgc
ctcttgaaaatggaagaaacacttcacaccagaatcattggccaggatgaagctgttaaa
gccattagtcgcgctatccgacgtgctcgtgttgggctcaagaatcccaaccgacctatt
gccagtttcatcttttctggtccaactggtgttgggaaatcagaactggctaaggcttta
gcagcgtactactttggttctgaagaagcaatgatccggcttgatatgagtgagtttatg
gagagacacactgtctctaaactcattggttcaccccctggttatgttggttacactgaa
ggtggtcaactgactgaagctgtgaggcgtcgaccttacactgttgtgctctttgatgag
attgagaaggctcatcctgatgtcttcaacatgatgcttcaaattcttgaagatggaaga
ttgacagacagcaagggcagaactgtcgacttcaagaatacacttctcatcatgacatcg
aatgttggaagcagtgtgatagagaaaggaggccgtcgtataggttttgatctagattat
gacgagaaggatagcagttacaaccgtatcaaaagcttagtgactgaggagttgaaacag
tacttcaggccagagttcttgaacagattggatgagatgattgtattccgtcagctcact
aagttagaggtgaaggagatagctgatatcatgcttaaggaggtctttgagaggttgaaa
aataaggagatagaacttcaagtgacagagaggtttagagacagggtggttgacgaaggg
tacaacccaagctacggagcaagaccgttgaggagagctattatgagactgctggaagac
agcatggccgagaagatgcttgcaggtgagatcaaagaaggtgattcagtaattgtggac
gtggactctgatggcaatgtgaccgtcctcaatggcactagcggaactccctcagatgca
gctcctgagcctatccctgtgtag
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