Nicotiana attenuata (coyote tobacco): 109223540
Help
Entry
109223540 CDS
T05870
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109223540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109223540
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
109223540
Prokaryotic type
Archaeal type
TFE
109223540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
CpXC
HVO_2753_ZBP
Cas12f1-like_TNB
Zn_ribbon_SprT
Zn_ribbon_8
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
109223540
NCBI-ProteinID:
XP_019243450
UniProt:
A0A1J6IIJ1
LinkDB
All DBs
Position
3:complement(37452196..37461176)
Genome browser
AA seq
470 aa
AA seq
DB search
MSIEPFNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGIAVVILDALTRRQWVREEDLAK
DLKLHTKQLRRTLRFFEEEKLITRDHRKEGAKGAKVYNAAVAATVDVLQNGKEGDDKIKM
HTHSYCCLDYSQIFDVVRYRLHRMKKKLRDELDNKNTVQEYICPNCGKRYTALDALRLVS
PEDEYFHCESCNGELVAESDKLSSQGTVDGDDKDRRRRREKLEDMLHRMEAQLKPLMDQL
NRVKDLPAPEFGSLQAWEVRANAVARGANGDNANDSKSGQGFGGTPMPFVGETKVEVAFS
GLEEKGDIKSEISATPMKVLPPWMIKEGMNLTKEQRGEVKQESSMEGTSAAAGLSDDKKS
IETEDVKNIKDEYVKAYYEALFKRQREQEEAVKGLQETSTTDGVDNTSTERQVGMKSKRE
EEDEGEDIEWEEAPPAGDNTTANFKVDLNVQADASGDENDEEDDIDWEEG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgaaccctttaatcgattggtgaaacttgcggctagagctttttacgatgac
attacgactaaaggtgacaatcagcccaaatctggcagaagtgacaatcgaggaattgcg
gtggttattctagacgcactcacaaggcggcaatgggtgagggaagaagacttggcaaag
gacttgaagttgcacacaaagcaactccgccgcaccttgcgtttcttcgaagaagaaaag
ctcatcacgcgggatcataggaaagagggagcaaaaggtgcaaaagtatacaatgctgca
gttgcagctacagttgatgtcctgcagaatgggaaagaaggagatgacaaaataaagatg
catactcattcttattgctgcctggactattctcagatatttgatgtcgtgaggtacaga
ctacaccgaatgaagaaaaagttaagagatgagctggataacaaaaacacagtgcaggag
tatatatgtcccaattgtggaaaaagatataccgcattggatgcattgcggttggtgtct
cctgaggatgagtacttccactgcgaaagttgcaacggggaactagtggcagagagcgac
aagttatcctctcaagggactgtagatggggatgataaggataggagacggcgtcgcgaa
aaattggaagacatgcttcataggatggaggcacaactcaaaccgttgatggatcaactt
aacagagtaaaagatttacctgctcccgagtttggaagccttcaagcgtgggaagtgcga
gccaatgctgtggcccgaggtgcaaatggagataatgcaaatgattcaaagtcaggacaa
ggatttggtggaacacctatgccttttgttggagagacaaaggttgaagttgctttctct
ggtcttgaagaaaaaggagatatcaaatctgagatttcagctacaccaatgaaagttttg
cctccatggatgataaaggagggaatgaatcttacaaaggagcagcgtggagaggtcaag
caagagtccagtatggagggtacttctgctgcagcggggttatctgacgacaagaagtcc
atagaaactgaggacgtgaaaaatataaaggatgaatatgttaaggcatattatgaggct
ctattcaagcgacaaagagagcaagaagaagctgtcaaaggtttacaggaaacatcaact
acagatggagtggataacacctctactgagcgccaagtcggcatgaaatccaaacgtgaa
gaggaggatgaaggagaggatattgaatgggaggaggccccacctgcaggtgataataca
actgcaaatttcaaggttgacttgaatgtccaagcagatgcttcaggagatgaaaacgat
gaggaagatgacatagactgggaggaaggttga
DBGET
integrated database retrieval system
