Nicotiana attenuata (coyote tobacco): 109223610
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Entry
109223610 CDS
T05870
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109223610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109223610
03036 Chromosome and associated proteins [BR:
nau03036
]
109223610
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109223610
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109223610
PBAF complex
109223610
GBAF(ncBAF) complex
109223610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Mesothelin
Motif
Other DBs
NCBI-GeneID:
109223610
NCBI-ProteinID:
XP_019243538
UniProt:
A0A1J6IW16
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Position
3:complement(42790260..42793009)
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AA seq
527 aa
AA seq
DB search
MNNNNTVRNVGLGNSGPMQIPQSMPMNHNQPAAHLFSQSHAQRASQFPGHFQLSEPQSQR
SHAQFQGQAQAFSHFITSGVNTNVSSPATSTPNTTGGTRKVLQRPTSRAGGSSGHGQATA
SPLKTMELTPAVRRKKRKVSDKCIPDKVAANLPESVLYSQLLELEARVDAALYRKKIDML
ESLKGPPHVQKTLRIYVFNTFANQTPPADSESKTTEPPSWSIKIFGRILGGGPDRPASEM
EQKSGVSYPKFSSFFKKITVYLDQSLYPDHHVILWDSSRAPVHHDGFEIKRKGDKDFTAI
IRLEMNYMPEKFKLSPALQEVLGIEVETRARVLAALWYYVKSRKLQISDDTSSFTCDPPL
RKVFGEEKLKFSLVSQKINPHLTAPQPTHLEHRIKLSGSSPAGNTCYDVLVDVPFTLQKE
MSTFLSNLENNKEIDACDEAISTAIKKIHEHQRRRAFFLGFSQSPADFINALVASQARDL
KLVSGDSGRDAEMERRSEFYNQSWTEDAVIRYLNRKHASGTDHSASK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaataataacaacacagttaggaatgttggtttaggaaattcagggccaatgcaaata
cctcaatctatgcccatgaaccataatcaaccagcagcacatcttttctctcagtcacac
gcacaacgtgcgtcacagttccctggccattttcaattatccgaaccacaatctcaacgt
tctcatgctcaattccaaggccaagctcaggcctttagccattttatcacttcaggggtt
aacaccaatgtctcatcccctgctacttccacacccaatactactgggggtactagaaaa
gtgctccagagaccgacttctcgtgctggtggttcctctggtcatggccaagcaactgct
tcacctttaaagactatggaattaacccctgctgtgcgtagaaaaaagcgtaaagtttct
gataagtgtatacctgataaagtggctgcgaatttgcccgaatctgtgctttactctcag
ttgcttgaactcgaggctcgtgtagatgctgctctttatagaaagaagattgacatgttg
gaatcccttaagggtcctccgcatgtccaaaagaccctcaggatctatgtattcaacact
ttcgcaaatcagacaccaccagctgattccgagagcaaaactactgagccaccttcttgg
tctattaagattttcgggaggatcttggggggtgggccagatcgtcctgcatctgaaatg
gagcagaaatcgggtgtttcttaccccaagttttcatctttctttaagaaaattactgtt
tacttggatcagagtctctatcctgatcaccatgtaatcttgtgggatagctctcgagca
ccagtgcatcatgatggttttgagattaagaggaaaggggataaggattttacagcaatc
atcagactggaaatgaattatatgcctgagaaatttaaactttcgccagctttgcaagag
gttcttggtattgaggttgagacacgagcgagagttttagctgctctctggtactatgta
aaaagtaggaagctacagatatccgatgacacctcctcgttcacttgtgatccgcctctc
aggaaggtttttggagaagaaaagttgaaattttccctggtttcccaaaagattaatccg
catctgactgcccctcaacctactcatttggagcacaggattaagctatctggaagtagc
ccagctggtaacacttgttatgatgtacttgttgatgttcccttcacattgcagaaggaa
atgtccactttcttatctaatttagagaataacaaggagattgatgcatgtgatgaagct
atttctactgctataaagaaaatccatgaacatcaaagaaggcgagctttttttcttgga
tttagtcagtcacctgctgattttattaatgcattagttgcatctcaagccagagatctt
aagcttgtttctggagattctggccgtgatgcagaaatggagcggcgttctgaattctac
aatcagtcttggactgaagatgctgtcatccgctacctgaaccgcaagcacgcttctggt
actgaccattctgcaagcaaatag
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