KEGG   Nicotiana attenuata (coyote tobacco): 109223829
Entry
109223829         CDS       T05870                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03013  Nucleocytoplasmic transport
nau03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109223829
   03015 mRNA surveillance pathway
    109223829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nau03019]
    109223829
   03041 Spliceosome [BR:nau03041]
    109223829
Messenger RNA biogenesis [BR:nau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109223829
Spliceosome [BR:nau03041]
 Complex C
  Other components
   EJC/TREX
    109223829
SSDB
Motif
Pfam: Pinin_SDK_memA
Other DBs
NCBI-GeneID: 109223829
NCBI-ProteinID: XP_019243818
UniProt: A0A1J6ISM3
LinkDB
Position
1:complement(30655898..30660837)
AA seq 421 aa
MASAVVEKTEEELRKDLFELNRQQREITERLKDPRGLRRGGFSSGGGPRSFVANGGRQRG
LVRPAERNDAEDQPAPKRRISSAVVKIEEGEIADDVSRAPTDANKEDSAVEEGSSREAHV
SQNERKPSNWLRRDGNQRPSKMDSDVPPPEPLPRVLPKNEDPKLVSRNKRMLGQLLGTLE
KFRKEDMQLSGSEAYMRRSDSLKRAEQRAREESEKLRQQEREQRDEKLKRDLTLRARLAA
KAEEKRLELLFLRWSEHHKKLANFIRTKAEPPIFYSFAKPLEEDPSLVEQKKDQIFQEWK
AARREDLSLYQKQIAEQYVANAEGEWKNILERRANRNPANLQETMDKELESHRLERGPKT
RKIPGVSNNEDEDVEDINVAEDDMMDDVLDVDDNNQRSDEIVKVEAGNGSTQIDNNDQQK
I
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcgagcgccgtagtggagaagacggaggaagagctccgtaaagatctctttgaactg
aatcgtcaacaacgcgagataactgagcggcttaaggatccaagaggtcttcgccgcggt
ggattctccagtggcggtggtcctcggagttttgttgccaacggcggccgccaacgtggc
cttgttagacctgcggagaggaatgatgcagaggatcagccagcacctaaaaggcgtatt
tcttcagctgttgtgaagattgaagagggggagattgctgacgatgtctctagagctcca
acggatgcgaataaggaagattcagctgtcgaggagggaagttcaagggaggcacatgtc
agccagaatgagagaaagccatccaattggcttcggagggatggcaatcaaagaccctca
aaaatggattctgatgttcctccaccggaacctttgccgagagtgttgccaaaaaatgag
gatcctaaattggttagtaggaataagagaatgttgggacagctgttggggaccttggag
aagttccggaaagaggacatgcagctttcagggagcgaggcttacatgcggaggtcagat
tctttgaaaagggctgagcaaagggcgcgtgaagaaagtgagaagttaagacaacaagag
cgtgagcagcgtgatgaaaagctgaaaagagatctgactcttcgagcacgtcttgctgct
aaagctgaggaaaagaggttggaattgctgtttcttcggtggagtgagcaccacaaaaaa
ctagccaattttataaggaccaaagccgagcctccgatcttttattcttttgccaaacca
ttggaagaagatccaagcttagttgagcagaaaaaagatcagatattccaagaatggaaa
gctgcaaggagagaggatttgtcactataccagaaacaaattgctgaacaatatgttgca
aatgctgaaggggagtggaaaaatattttggaaaggagagccaacagaaatccagcaaac
ctccaagagacaatggacaaggagctagagagtcataggcttgagcgtggacccaagact
agaaagatccctggtgttagcaacaatgaagatgaggatgttgaggatatcaatgttgcg
gaggacgatatgatggatgatgtgcttgacgtggatgataataaccagaggagtgatgaa
attgtaaaagttgaagcaggtaatggtagtacacagattgataacaatgatcagcagaag
atatga

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