Nicotiana attenuata (coyote tobacco): 109223850
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Entry
109223850 CDS
T05870
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109223850
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109223850
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109223850
NCBI-ProteinID:
XP_019243842
UniProt:
A0A1J6IK20
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Position
3:59540413..59544165
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AA seq
411 aa
AA seq
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MVLVLAATTMVYLGIFLVLLCMVSPVWSADDIKTFNVVNFGAVGDGKTDDLPAFLKAWEA
VCQSESSRVILVIPERKKFLLTPSTFEGPCKPSFIHIQVSGNIIAPSSKSGWDGRATNAW
LIFENIDHLTVNGNGVFDGQGHVWWSNPCLDDNNPSQETQCKGPTALIFRRCDWLRVWGV
TLIRSARSHIILTACNEVSIANIRIMSPGDSPNTDGIDVSASTNVRLHNSLIATGDDCIA
IGGGSSNVNISGITCGPGHGISIGSLGEGGFEIVEDVLIRNCTIKETLTGVRIKTWQGGE
GYARRITFEGIKLVAVNNPIIIDQFYCPSRVNCKNDTAAVALSDITFRGISGTSLMDEVI
NLSCSETVGCKNILLDRVYISSVKGNPVHAKCISAHGRHTHTRPVVSCLLP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggttcttgtactagctgctactacaatggtttacttgggaattttcttggttttgttg
tgcatggtttctcctgtatggagtgctgatgacattaaaactttcaatgtcgtgaatttt
ggggcagttggagacggaaaaactgatgatctcccagctttcctcaaggcatgggaagct
gtctgtcaatcggaatccagccgtgtaattcttgttataccagaaagaaagaaattctta
ctgactccttcaacatttgagggtccatgcaaaccctcttttatccatattcaggtatca
ggaaatataattgcacctagctcaaaatcgggatgggatggacgtgccaccaatgcatgg
ctcattttcgagaatatcgaccatcttactgttaatggaaatggagtttttgacggccaa
ggccatgtatggtggtctaatccttgcttggatgataacaacccatcccaagaaacacaa
tgcaaaggaccaactgcattgattttcagacgatgcgactggcttcgagtttggggtgta
acgctaattagaagtgctagaagtcatatcatattgactgcttgcaatgaagttagtatt
gctaatattcgtattatgtcccctggtgatagtcccaacaccgatggtatagacgtttcc
gctagcacaaacgtacgattacacaattccctcattgcaacaggcgacgactgtattgca
ataggaggaggatcgtccaatgtcaatattagcggcataacatgcggaccaggccatggt
attagtattggatccttgggagaaggaggatttgaaattgtggaagatgtgctcatacga
aattgcacgattaaagaaaccttaacaggagtaagaattaagacctggcagggaggcgaa
gggtatgcaaggaggataacttttgaaggaataaaattggttgcagtcaacaatcccatc
atcatcgaccagttttactgtcccagccgagtcaattgcaaaaatgatacagctgcagtt
gcattgagcgacataacattcagaggaatatcagggacatccctgatggacgaggtgata
aatctgagctgcagcgaaactgttggctgcaaaaacatacttctcgatcgtgtgtatata
tcatctgttaagggtaaccctgttcatgccaagtgcattagtgctcatggaagacacact
catactaggcctgttgtgagctgtctgctgccatag
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