Nicotiana attenuata (coyote tobacco): 109223880
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Entry
109223880 CDS
T05870
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nau01002
]
109223880
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109223880
04121 Ubiquitin system [BR:
nau04121
]
109223880
Enzymes [BR:
nau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109223880
Peptidases and inhibitors [BR:
nau01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109223880
Membrane trafficking [BR:
nau04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
109223880
Ubiquitin system [BR:
nau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109223880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
USP7_C2
DUSP
Motif
Other DBs
NCBI-GeneID:
109223880
NCBI-ProteinID:
XP_019243894
UniProt:
A0A1J6IJ14
LinkDB
All DBs
Position
3:60554569..60566284
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AA seq
883 aa
AA seq
DB search
MDNPSEDSSDSPQQQPESPVNDDQRVYFVPYRWWKEAQESAPSDGKSATLYAAAPAPSYG
GPMKIINNIFSPDVAFNLRREEESLSQSQENGEVGVSGRDYALVPGDIWLQALKWHSNSK
AAAKNGKSFSATDEDIADVYPLQLRLSVLRETSSLGVRISKKDNTVECFRRACRIFSVDT
EPLRIWDLSGRTALFFSDENNKILKDSQKQSEQDMLLELQVYGLSDSVKNKAKKDEMSMQ
YPNGSSFLMNGTGSGITSNLTRSSSSFSGGPCEAGTLGLTGLQNLGNTCFMNSALQCLAH
TPKLVDYFLGDYKREINHDNPLGMNGEIASAFGDLLKKLWAPGATPVAPRTFKLKLAHFA
PQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEAKDGDDRPDEEIADEYWNNHLARN
DSIIVDVCQGQYRSTLVCPVCKKVSIMFDPFMYLSLPLPSTSMRSMTVTVIKNGSDIQIS
DFTITVPKDGKLEDLIRALSTACSLDADETLLVAEIYNNRIIRYLEEPADSLSLIRDGDR
LVAYQLHKGTEEAPLVVFTHQQIDEHYIYGKLTSNMKTFGIPLAAHSRVLTGSDIRSLYL
QILTPFLVHNTAQADNLNCDRSATEVCTDSEVSTDMEPGNSIVNGIPESIAEEDTAEPLD
MEFQFYLSDDKATFKGSEIVMNERLQSTDISGRLNILVSWSPKMLEQYNTGLFSSLPEVF
KSGFFAKRPQESVSLYKCLEAFLKEEPLGPEDMWYCPACKQHRQATKKLDLWRLPEILVI
HLKRFSYNRFLKNKLETYVDFPTHDLDLSSYLAYKDGKSSYRYMLYAISNHYGSMGGGHY
TAFVHQGADRWYDFDDSHVYPISQDKLKTSAAYVLFYRRVEEI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggataacccatcggaggattcctcggattctcctcaacagcagcccgaatctcctgta
aacgatgaccaacgtgtttatttcgttccttacaggtggtggaaggaagcacaggagtca
gcaccatcagatgggaagtcagcgactttgtacgcagcggcaccagctccatcttatgga
gggccaatgaaaatcattaacaacatatttagcccagacgtcgcatttaacttgaggaga
gaggaagaatctttatcacagagtcaggagaatggtgaagttggggtatctggtcgggac
tatgctttggtccctggcgacatttggctgcaggcactcaaatggcacagtaactctaaa
gctgcggctaagaatggaaaaagcttttcagctacagatgaggatattgcagatgtctat
cctttacagctgaggctttctgttttgcgggaaaccagttccttgggagtcaggataagc
aaaaaggacaatacagttgaatgctttagaagggcctgcagaatttttagtgtcgacaca
gaacccttacggatttgggatttatctgggcggacggcattgtttttttcagatgaaaac
aataagatcctcaaagactctcagaaacagtcagagcaagatatgctcttggagttgcag
gtctatgggttatcagattctgttaaaaataaagcgaaaaaagatgagatgtcaatgcaa
taccctaatggttcttcttttctgatgaatggtactggcagtggtataacctctaatctc
actcggagcagttcatcattttctggaggtccatgtgaagctggtaccttgggcttgact
ggattgcaaaacctagggaacacctgtttcatgaacagtgctcttcagtgccttgcacat
acgccaaagcttgtggattactttctcggggactacaagagagaaataaatcatgataac
ccattgggaatgaatggtgaaattgcatctgcttttggtgaccttttgaagaaattatgg
gctcctggagcgactcctgtggcacctagaacattcaaattaaagcttgctcattttgct
cctcaattcagcggctttaatcagcatgattctcaggagctcctagcttttctattggat
ggactccacgaagatttgaaccgtgtcaagaataaaccttatgttgaagctaaggatgga
gatgatcgtccagatgaagaaattgctgatgaatactggaataatcatctggctcgtaat
gattccatcatagtggacgtttgccagggtcaatatcgttccacattggtctgtcctgtt
tgcaaaaaggtctccatcatgtttgatcctttcatgtatttgtcactgcctcttccatct
acatctatgaggtcaatgaccgtcacagttataaaaaatggcagtgatattcagatatct
gactttacaatcactgttcccaaggatggaaaacttgaagatcttattcgtgctttaagc
actgcatgctctttggacgctgatgagacccttttggtggctgagatatacaacaaccgc
attatacgttatcttgaggagccagccgattcattatccttaataagagatggtgaccga
cttgttgcttatcagttgcacaagggtactgaagaagcccccttggttgtgtttacacat
caacagattgatgagcattacatatacggaaagctgacctcaaatatgaagacatttggc
attccgcttgccgcgcatagtagagttcttacaggatctgatatccgtagtctttatcta
cagatacttacaccattcttagtccacaatacagcccaagcagataatcttaactgtgat
agaagtgctactgaagtatgtacagattcagaagtcagcacagacatggaacctggcaac
tcaatagtaaatgggattccagaaagcattgctgaagaagatactgccgaacctttagac
atggaatttcaattttacctatcagatgataaggcaacctttaaaggctccgagattgta
atgaatgagcgattacagtccacagatatctctggacggttaaatatacttgtaagttgg
tcacctaaaatgcttgaacagtacaatacaggccttttcagctcactgccagaagttttt
aaatctgggttttttgccaaaagaccacaagaatctgtctctctgtataaatgtcttgag
gcatttctgaaggaagagcctctagggccagaagatatgtggtattgccctgcatgcaag
cagcatcgccaagctactaaaaagttggatctttggaggctgccggagattctggtcatc
cacctgaagaggttctcgtacaaccggtttctgaagaacaagttggagacgtatgttgac
ttcccaactcatgatcttgatttatcctcatatttggcctacaaggatggcaaatcttcc
tatcggtatatgctttatgcaattagcaaccattatggaagcatgggagggggtcactac
actgcgtttgttcatcaaggtgctgatcggtggtatgacttcgatgacagccatgtgtat
cccatcagccaggacaagctcaaaacctcggctgcctatgtcctattttatagacgagtt
gaagaaatctaa
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