Nicotiana attenuata (coyote tobacco): 109223890
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Entry
109223890 CDS
T05870
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109223890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nau03400
]
109223890
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
109223890
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
109223890
DNA repair and recombination proteins [BR:
nau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109223890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
109223890
NCBI-ProteinID:
XP_019243908
UniProt:
A0A1J6IK63
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All DBs
Position
3:60962175..60967626
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AA seq
446 aa
AA seq
DB search
MPELPEVEAARRAIEDHCIGKKIVKAIIADDPKVIDGVSPDDFRASLEGKTIVAAYRKGK
NMWIELDSSPFPTFQFGMAGAIYIKGVAVTKYKRSAVKDDDEWPSKYSKVFLELDDGLEL
SFTDKRRFARVRLLKNPVSVPPISELGPDALLEPMTVDEFYKAFSKKKIGVKALLLDQSF
ISGIGNWIADEVLYQARIHPMQTASIISKEDCATLLKCINEVVEKAAEVGADNSQYPSSW
IFHSREKKPGKAFVDGKKIEFITAGGRTSAFVPDLQKIVGAESAKAAGKRQQGKVKRVKH
NDSDGEDEEPEIEEAEAGKSKGKQRGTDNKRASTNKKLKGSNGDNDENDNDNDEGLKNPS
EKAKHSGSSKGKGGNQEKKARANMAAKRKLEESGDDEDDDGSEGDDDNEGGKDRKLSSKT
KSKGKKTTKRTAEPRQTRNKLSNKQK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttccggaggtagaggcagctcgaagagccatagaggaccactgcataggc
aagaaaatcgtgaaagccatcatcgccgatgatcccaaggtcatcgacggcgtgtctccc
gatgatttcagagcctctcttgagggcaaaaccatcgtagctgcttatcgcaagggaaaa
aacatgtggattgagctcgattcctctccttttcctacttttcagttcggaatggcgggt
gctatatacatcaaaggagttgcagttacaaaatataaacggtctgctgtaaaagacgat
gacgagtggccttccaagtattcaaaggttttccttgagttggacgatggtttggagctc
tcatttactgataagaggcggtttgccagggtgcgcttgctgaagaatccggtttctgtt
cctccaatatctgaacttggtcctgatgcactgttggagccaatgactgtagatgagttc
tataaagctttcagcaagaagaagattggtgttaaggctttattacttgaccagagtttt
atttcaggaattggcaactggattgcagatgaagtgctatatcaggcaagaatccatcct
atgcagactgcttctatcatatccaaagaggactgtgcaacattgctgaagtgcatcaac
gaggtcgtcgaaaaagctgctgaagttggcgcagataatagtcagtatccttctagttgg
attttccattcccgggaaaagaaacctggcaaggcctttgttgatgggaagaaaatcgag
tttatcacggctggtggcaggacttcagcctttgtgccggacctacaaaagatagtggga
gctgaatctgcaaaagcagcaggtaaacggcagcagggcaaagttaagagagtcaagcat
aatgatagtgatggtgaagatgaggagccagaaattgaagaggcagaagctgggaaatca
aaagggaagcagcgtgggacagataataagagagcttctactaacaagaagttgaaggga
agcaatggtgacaatgatgaaaatgataatgataatgatgaaggtctaaagaatccttct
gaaaaagcaaaacacagtgggagctccaagggaaaaggtggcaatcaagagaagaaagcc
agagcaaatatggctgcaaaaagaaaactagaggaaagtggtgatgatgaagatgatgac
ggtagtgagggtgatgatgataatgaagggggcaaggatcgcaagctttctagtaaaaca
aaatcaaaggggaagaagacgaccaagcgaacggctgaaccaaggcagactaggaataag
ctgtccaataagcagaagtaa
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