Nicotiana attenuata (coyote tobacco): 109223939
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Entry
109223939 CDS
T05870
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nau03000
]
109223939
04121 Ubiquitin system [BR:
nau04121
]
109223939
Transcription factors [BR:
nau03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
109223939
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
109223939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
109223939
NCBI-ProteinID:
XP_019243985
UniProt:
A0A1J6IJ82
LinkDB
All DBs
Position
3:64414040..64418286
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AA seq
1122 aa
AA seq
DB search
MSLSSAQNNRRNNNSNRPGNNPVQSARREWVPRGSTATTTVSAAPVTTTVATTVVSPAFN
LNGSSSAGNGREKDNVSVAPVHRRNQTYLGPNLNKGPTYARRERGRGRENHNYQENRVER
AVNGRINQGEHKRLKDPNLPQLVQEIQEKLLKGNIECMICYDMVRRSAPVWSCSSCYSIF
HLNCIKKWARAPTSVDTSAEKNQGFNWRCPGCQSVQLTSSKEIRYICFCGKRPDPPSDLY
LTPHSCGEPCGKKLEKELPGHDLSEEDLCPHVCVLQCHPGPCPPCKAFAPARSCPCGKEV
ITTRCSDRKSVLTCGQQCGKLLDCGRHRCEQTCHVGPCGHCQVIVNAYCFCKKKTEVVLC
GDMGVKGDIKIEDGVFSCSSACGRKLSCGNHVCLELCHPGPCGDCALLPSKVKTCCCGKS
SLEDERHSCLDPIPTCSKVCGKSLRCGVHRCQAVCHSGDCAPCLVPVTQRCRCGSTSRTV
ECYKTQAEDEKFTCDRPCGQKKNCGRHRCSERCCPLSNPKNSVTGGWNPHFCSMPCEKKL
RCGQHSCESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPSPSCQLPCSVPQPCG
HPPTHSCHFGDCLPCAVPVAKECVGGHVILRNIPCGSKDIRCNKLCGKTRQCGLHACART
CHSSPCDFSAGPSNGSRASCGQTCGAPRRDCRHTCTALCHPSSPCPDVRCEFPVTITCSC
GRVTANVPCDAGGQIVDSVFEASIIHKLPSPLQPIDINGKKVPLGQRKLTCDDECAKMEK
KKVLSDAFGITPPNLEALHFGDAAVSEVLGDLLRRDPKWVLSIEERCKCLVLGRSRGGVN
ALKVHVFCPMLKEKRDAVRLIAARWKLSVNAAGWEPKRFITVHVTPKSKAPARILGAKGC
TVNNIAQPAVFDSLVDMDPRLVVALFDLPRDADISALVLRFGGECELVWLNDKNALAVFS
DPARAATAMRRLDQGSAYCGAAVVPQSGVASAVTSSTNAWGVFGAAKDGGGAAALKGNPW
KKAVVQEPHLRDSPWDPEEWSKNPTDSAPSAWRTNEATTAASSNRWSVLEPEMTSNLARA
SITIKEPVTEPGVGGSALPPKPQDVGVDEMADVVDDWEKAYD
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttcatctgcacagaacaatagacggaataacaacagtaatcggcctggaaac
aatcctgttcaaagtgctcgacgtgagtgggtacctcggggatccacggccaccaccact
gtttcagctgcccctgtcaccaccacggtagctaccactgttgtgagccctgcgttcaat
cttaatggttcaagctcagctggaaatggaagagaaaaggataatgtgtcagttgcaccc
gttcatcgtcgaaatcagacatatctaggacccaatctcaacaagggacccacatatgcg
aggagagagaggggaaggggcagggagaaccataattatcaggagaacagggtggagagg
gcggtcaatgggaggattaatcagggcgaacacaaacggttgaaggaccctaatttgcct
caacttgtgcaagaaattcaggagaagctgttgaagggaaacattgagtgcatgatttgc
tatgatatggtgcggaggtctgcccctgtttggtcatgttcgagctgttactccattttc
catcttaattgtatcaaaaaatgggccagagctcccacttctgttgacacatctgcggag
aagaatcagggatttaattggcgctgtccaggctgtcaatcagtgcagctcacttcatcc
aaggagatccgatatatttgcttttgtgggaagaggccagatcctccttcagatttgtac
ttgaccccacattcatgtggagagccctgtggcaagaaacttgagaaggagcttccaggg
catgatctgagtgaagaggatctgtgccctcacgtttgtgtcctacaatgccatcctggt
ccttgtccaccttgtaaggcatttgctccagctagaagttgcccctgcgggaaggaagta
attaccactcggtgctctgatcgcaagtccgttcttacctgcggacagcagtgtggtaag
cttcttgactgcgggcgtcatcgttgtgaacagacttgccatgttggtccttgtggccat
tgtcaagttattgtgaatgcctattgcttctgtaagaagaaaacagaggttgttctttgt
ggagacatgggtgtgaaaggagatatcaagatcgaggatggcgtcttttcatgcagttca
gcttgtggaaggaagcttagctgtggaaaccacgtctgtcttgagctctgccatccaggg
ccatgtggggattgtgccttgttgccaagcaaggtcaagacatgctgctgcggtaaaagc
agcttggaagacgaaagacacagttgtttagatccaattccaacctgttccaaggtctgt
ggtaaaagcctcaggtgtggggtacatcgctgtcaggcggtgtgtcattctggtgattgt
gcaccatgtcttgttcctgtcactcaaagatgccgctgtgggtcaacttctcgaacagtg
gagtgttacaaaactcaggcagaagatgagaagttcacttgtgatagaccttgcgggcaa
aagaagaattgtggaaggcaccgttgcagtgagcgatgttgccctctttctaatccaaaa
aattccgtcacaggtggttggaatcctcatttttgttcaatgccatgtgagaagaagctt
agatgtgggcagcattcttgcgagtcactttgtcacagtggtcactgccctccctgcctt
gagacaattttcaccgatttgacttgtgcttgtgggagaacgtcaatccctcctccgcta
ccttgtggaacaccttctccgtcgtgtcagttaccatgctcggttcctcagccttgtggt
catccacctactcacagctgccattttggagactgtctgccatgtgctgttcctgtagca
aaggaatgtgtgggtggacatgtaattttgaggaatataccttgcggatcaaaagacatc
agatgtaacaagctttgcgggaagaccaggcagtgtggcttgcatgcatgtgctagaact
tgtcattcttcaccatgtgatttttctgctggccccagcaacggctccagagcctcttgt
gggcagacatgtggtgctcctagaagagattgcaggcacacatgtactgctctttgtcac
ccctcttcgccatgtcctgatgtgagatgtgagtttcctgttactattacttgttcttgt
ggccgggtcacagcaaatgttccttgtgatgctggaggtcagatcgttgactctgttttt
gaagcttctataatccacaagttgccttcacctcttcaacctattgatataaatgggaag
aaggttcctcttggtcagaggaagcttacttgtgatgatgaatgtgcaaagatggagaag
aaaaaggtcctttctgatgcttttggtataactccgccgaatttggaggccctccatttt
ggtgatgcagctgtctctgaagtgctaggggatcttcttaggcgtgaccctaagtgggtt
ttgtccatagaggaaaggtgcaaatgtttggtccttggcaggagcagaggcggggttaat
gcgctcaaagttcatgttttttgcccaatgttgaaggaaaagcgggatgcagttagactg
atagctgcaaggtggaagctttcagtgaatgcagctggttgggaacccaagagattcatc
actgtgcatgttacacccaagtccaaagctccagcgcgtatacttggtgccaaaggttgt
actgtcaataacattgctcaacctgctgtttttgattctctggtggatatggatccgagg
cttgttgtggctttgtttgacttgccaagagatgcagacattagtgcgttagttctcagg
tttggtggtgaatgtgagcttgtctggttgaatgacaagaatgccttggctgtgttcagt
gatcctgcccgagcagcaacagctatgaggaggctagaccaggggtcagcttattgtggt
gctgctgtagttcctcagagtggtgttgcatcagcagtgacatcctctactaatgcttgg
ggagtcttcggagcagccaaagatgggggaggagcggcagctcttaagggtaatccatgg
aagaaggctgtagtccaggagcctcatttgagggacagtccatgggatcccgaagaatgg
tccaagaatcccactgattcagccccttctgcctggaggacaaatgaagcaacaactgct
gcctcgtctaataggtggagtgtcttagagcctgaaatgacttccaatttggccagggcg
tctattacaatcaaggaacctgttactgagccaggagtgggtggttcagctttgcccccc
aaacctcaagatgtgggggtcgacgagatggcagatgtagtggatgattgggagaaggct
tacgattga
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