KEGG   Nicotiana attenuata (coyote tobacco): 109224008
Entry
109224008         CDS       T05870                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
nau  Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:nau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nau03036]
    109224008
   03400 DNA repair and recombination proteins [BR:nau03400]
    109224008
Chromosome and associated proteins [BR:nau03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109224008
DNA repair and recombination proteins [BR:nau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109224008
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_2 HEAT_EF3_N
Other DBs
NCBI-GeneID: 109224008
NCBI-ProteinID: XP_019244085
LinkDB
Position
3:67981672..68001230
AA seq 1140 aa
MAATPTIEYVNHIESYVSSSSSPAQQAASIDAIALLLKNDLLTLEVLVREMEMYLTTTDN
IIRSRGILLLGELLMRLILKPLGDTAISSLVEFFTERLADWKALHGALVGCLALLRRKSD
AGMINKSQAKAVAQSYLQNLQVQLLGLQDRKLCLQLLECLLDCYPDALLSLGDDLVYGIC
EAIDGEKDPQCLMLVFRVVEVLAQLFPESSGPLANFAGDLFDILGCYFPIHFTHPKGDEI
DVKREELSRALMLAFASTPLFEPSAIPLLLEKLSSSLPSAKVESFKYLSYCTLKYGGDRM
EKYTESLWSALKDAIFTCPHSILSVDSNTIDGIGFHESEIMAQALELLQVLVRQHNASFL
NLILGDGDISTFVNSFSQFDDFNSLSSEYKQRLHAVARILSVCVKSSGSSCNKVFESFFP
RLVDALRLSVENSPEAIHSALDAKFNFGALYLCVELLAACRQLVVSSDKVASAPDLSHDT
WCQILHSFSISLCSVFFCLIRASCAESTWNAYVYAAVKGLEILATFPGSFISASKFMYEK
ILLTLMSIIESDFNKTFLWKAALKVLVEISLFVNKYDEDVKAASFNSIVMQKIVSLISSG
DLNMPLSLKLQAIFDIGMTRKTFMLAAASQLEKTISANLSEIFVHGNLQLAELTAVLLEC
YSIKVLPWFHCNGGADEVSLNLAVNIFAKMENITSLSLGVKGNEFLDATMAAMKQAVAGC
SVESQVKVLRKALDVMATCSLFLSKDLILGTNRFNKKSQLCQTFDGLSCRDEWITSLFAS
VVIALHPQTRIPNIRLLLQLLTTTLLEGHLPSAQALGSLVNKLPVNISEDCSLEEVIDML
FKNEMWCNIIIGKEGSDGGAVNMGNPRISSMNSHAVIGLAWIGKGLLMRGHEKLKDVTMT
FLSYLVSSGHNGNLLPFKDQMKDGAEHEVLCLRKSAADAFHILMSDSDACLNRNYHAIIR
PLYKQRFFNIMLPMFLSAIVKCDSSTTRCFLYQAFAHLISETPLAAIVGDAKKVLPVLLD
CFLMLSKDVSHKEIIYSVIIVLSGIITDKNGQEAIVENAPTVICRLTELTSYPHMMVIRE
TAIQCLAAMSELPYARIYPMRTQVLQALSKALDDTKRVVRQEAVKCRQAWASIASRSLHF
NT seq 3423 nt   +upstreamnt  +downstreamnt
atggcagcgactcctacaattgagtatgtcaatcacattgagtcttacgttagctcttcc
agctctcctgcacagcaggcggcaagcattgatgcaattgctcttcttctaaaaaatgac
ttgttaactttagaagtcttggttagagaaatggagatgtatttgaccactacagataat
atcattcgttcaagaggtatcctcttacttggagaactattgatgcgactaatattgaag
cccttgggtgatactgcaataagcagcttagtggaattcttcacagagaggctggcagac
tggaaagcgttgcatggtgcccttgttggttgtttggctctgctaaggaggaaaagtgat
gctggcatgatcaataagagtcaagcaaaggccgttgcgcagtcttatctacaaaacctg
caggtgcagttattgggactgcaagacaggaagctttgtcttcaactattggaatgccta
ttggattgttatccggatgcccttttgtcactgggtgatgatcttgtatatggaatctgt
gaagctattgatggtgaaaaggacccacaatgcttgatgctcgtatttcgtgtagttgaa
gttctggcacaattatttcccgaatcttctggcccattggcgaattttgcaggggatctg
ttcgatattttgggatgttactttcctatccattttacccatcctaaaggtgatgaaatt
gatgtaaagagggaggaactctctagagccctaatgctggcgtttgcttccacgccactt
tttgaaccctcagccattccattacttcttgaaaaactatcttcttctctgccatcagca
aaggtggaatcttttaagtaccttagctactgcacattgaaatatggaggagatagaatg
gaaaaatacactgaatccctttggtctgcattaaaagatgcaatatttacttgcccgcac
tccattttgtcagtggattccaatacaatagatggaataggttttcatgagagtgaaatt
atggcgcaggcccttgaacttcttcaggtgcttgttcggcagcataatgcgtcattctta
aatttgattctgggtgatggggacataagcacatttgtaaattccttttcccagtttgac
gatttcaatagtctttcttctgaatacaagcagagattacatgcagttgctcgtattctt
tctgtttgtgttaaatcttctgggtcttcctgcaataaagtttttgaaagtttctttcct
cggttggtggatgctttaaggctctcggttgaaaattcccccgaggctattcattcagct
ttggatgcaaaatttaacttcggagccttgtatctttgtgtcgaactccttgctgcatgc
agacagctggtagtcagctccgataaagtcgcttcagctccggatctatcgcatgacact
tggtgccagatacttcatagtttctccatatcattatgcagtgttttcttttgtctcatt
cgagcaagttgtgctgaaagcacttggaatgcttatgtttatgcagcagttaaaggtttg
gagatcttggctacatttcctggaagctttatttcagcgtcaaagttcatgtatgagaaa
atcctgctgactttgatgtcaatcattgaatctgatttcaacaagacgtttctatggaag
gcagcgttgaaagttttagtggaaatcagcttgtttgtcaataagtatgacgaggatgta
aaggcagctagctttaacagtattgtcatgcaaaagattgtttctctaatttcttcgggt
gacttaaatatgccgctatcactcaagctacaggccatttttgacattggaatgaccagg
aagactttcatgcttgctgctgcaagccaattggagaagactatatctgccaacttatct
gagatttttgtccatggaaatctgcagttagctgaactgacagctgtgcttttggaatgt
tattcgattaaggtacttccatggttccattgcaatggaggtgcagacgaagtctctttg
aatcttgcagttaatatttttgctaaaatggaaaatatcacatctttgagcctaggagta
aagggaaatgagtttctggacgcaacaatggctgcaatgaagcaagctgtggcaggctgt
tcagtggaaagccaggtaaaggttcttcggaaagctcttgatgtgatggcaacatgctcc
ttattcctatccaaggatttgattctaggaaccaatcgctttaacaagaaaagtcaactt
tgtcagacttttgatggtttgtcttgtcgagacgaatggattacttcactcttcgcatca
gttgtaattgcgttgcatcctcaaactcgaataccaaatataagactgttattacagttg
ttgacaacgactctccttgaaggtcatttaccgtcagctcaggccctggggtctttggtt
aacaaacttcctgtaaatatatcagaagactgtagtctcgaagaagttattgatatgtta
ttcaagaatgagatgtggtgcaacattattattgggaaagagggcagtgatggtggtgct
gttaatatgggtaacccgagaataagcagtatgaatagtcatgctgttattggattagca
tggatagggaaaggtttgcttatgcgaggtcatgagaagctaaaagatgtgactatgact
ttcttgagttacttagtttcaagtggacataacggaaatttgctgcctttcaaggatcaa
atgaaagatggcgcagagcatgaagtgctttgtctcagaaaatcagctgcagatgcattt
catattcttatgagcgactctgatgcttgtttgaacaggaattatcatgcaatcattcgc
ccactctacaagcaacggtttttcaacattatgttgcctatgttcttatctgcaatagta
aaatgtgactcatccactacacggtgttttctctatcaagctttcgcacacctgatatca
gaaactcctcttgctgctattgttggtgatgccaaaaaggtccttcctgtacttttagat
tgctttcttatgttaagcaaggatgtctctcataaggagataatttacagtgtcataata
gttctctccggaataataacagataaaaatggacaagaagctattgtagaaaatgcgccc
acagttatctgccgacttactgagctcacatcctatccccatatgatggtgattcgagag
actgcaattcagtgccttgctgccatgtcagagttgccgtatgcaaggatataccccatg
agaacacaggtgttgcaagcattatccaaagctcttgatgatacaaagagggtcgttcgt
caagaggcagtgaaatgtcggcaagcttgggcttcaattgcatcaaggagtttgcacttc
tga

DBGET integrated database retrieval system