Nicotiana attenuata (coyote tobacco): 109224028
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Entry
109224028 CDS
T05870
Name
(RefSeq) coatomer subunit beta'-2 isoform X1
KO
K17302
coatomer subunit beta'
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109224028
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nau04147
]
109224028
Membrane trafficking [BR:
nau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
109224028
Exosome [BR:
nau04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
109224028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Nup120_160
TPR_GEMI5
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
109224028
NCBI-ProteinID:
XP_019244112
UniProt:
A0A1J6JE08
LinkDB
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Position
3:complement(68839593..68850792)
Genome browser
AA seq
920 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKCVDLHPTEPWILASLYSGTVCIWNYQTQTMVKSFEVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIRSSRRVVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEVQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSRIKIFSKNFQ
EKKSIRPTFSAERIYGGTLLAMCSNDFICFYDWADCRLIRRIDVNVKNLYWADSGDMVAI
ASDTSFYILKYNRDVVSAHLDSGRSVDEQGVEEAFELLYEINERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVFLIDKEFNVIGYTLLLSLIEYKTLVM
RDDWDRANEVLPSIPKEHHNSVAHFLESRGMVEEALEVATEPDYRFELAIQLGKLDIAKD
IAVVAQSESKWKQLGELAMSAGMLEMAEECLKFANDLSGLLLLYSSLGDAEGITELATFA
KEQGKNNVTFLCMFLLGKVEECIQLLVDSNRIPEAAFMARSYLPSKVSEIVAIWRKDLSK
VNQKAAEALADPEEYPNLFENWQVACAVEARVAEERGGYTPATEYVNHADRSTNNLVEAF
NNMRMDEDPLENGDTDHEVAQQSGDEVQELEADDAQNEEQEEGQEEAVVVDADSNDGAVL
INGNEADEEWGTNSEGKPSA
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttaggttggagattaagaggaaacttgctcaaagatcagaaagggtaaagtgc
gtggatctacatcctacggagccatggatattagcaagtttgtattcggggactgtttgc
atctggaactaccagacccagacgatggttaaatctttcgaagttactgaattaccagtt
aggtcagcaaagtttatagcacgcaagcagtgggttgttgctggtgctgacgatatgttt
attcgtgtatacaattacaataccatggacaaggtcaaagtctttgaggcgcacactgat
tatattaggtgtgtggctgttcaccctactctaccatatgtgctgtcatcttctgatgac
atgcttataaagctctgggactgggataagggatgggtatgcactcaaatttttgagggt
cattcccattatgtgatgcaagtcacatttaatccgaaagacaccaatacatttgccagt
gcatctcttgatcggactataaagatttggaacctcggctcccctgacccaaacttcacg
ttggatgcgcatctaaaaggggttaattgtgtagactatttcactggtggtgataaacct
tatctgataacgggttctgatgaccacactgctaaggtgtgggactatcagacaaaaagt
tgtgtccagactcttgaaggccatacacacaatgtgtccgccgtatgttttcatcctgag
cttcctattataattacgggatctgaagatggtacagttcgtatatggcatgcaaccact
tatagacttgagaacactttgaattacggtcttgaaagagtttgggcaattggttacata
agaagttcaagaagggttgtaatcggttatgatgagggaactatcatggtaaaaattggt
cgagaagaaccagttgccagcatggataacagtggaaaaattatatgggctaagcacaat
gaagttcaaacagtcaacatcaagagtgtgggggcggattatgaggttactgatggagaa
aggttgcctttggctgtcaaggaattgggaacttgtgacctctatccacaaagcttgaag
cataacccaaatggaaggttcgttgttgtttgtggagatggagagtatatcatatatact
gctttagcatggagaaataggtcatttggttcagcactggaattcgtttggtcttctgat
ggagaatatgctgttagggaaagtacgtcaaggattaagatcttcagcaaaaatttccag
gaaaagaagagcatccgtcctactttctcagctgagcgcatctatggaggtactctattg
gcgatgtgctcaaatgattttatttgcttttatgattgggctgactgcaggctgatacgg
cgaattgatgttaatgtgaagaacctgtactgggctgacagtggtgatatggtggcaatt
gcaagtgatacatcgttctacatacttaagtataatcgtgatgtggtttctgcccattta
gatagtggaagatcagtagatgagcaaggcgttgaagaagcttttgaacttctttatgag
ataaatgaacgggtcaggacgggaatttgggttggcgattgcttcatttacaataattct
tcatggagacttaactactgtgtcggtggtgaggtgaccacaatgtttcatttagaccgg
cctatgtacctgcttggatatctggctaaccagagtagggttttcctgattgacaaagag
ttcaatgtcattggatatactttactgctaagcttgatcgagtacaagacacttgtgatg
cgtgatgactgggacagagcaaatgaggtgctgccatcgattcctaaggagcaccataat
agtgttgctcatttcttggagtcgcgaggtatggtagaggaagcattagaagttgcaaca
gagcctgactacagatttgaactagccatacagctgggaaaattagatattgcaaaggat
attgcagtggtagctcagagtgagtccaagtggaagcagttgggtgaactagccatgtct
gctggaatgctggagatggcagaggaatgtctgaagtttgccaatgacttgagtggtctg
ttgctactctattcttcactaggagatgctgaaggaataactgaactagcaacttttgcc
aaagagcaggggaaaaacaatgtcacattcctctgcatgttccttttgggtaaagtggag
gaatgcattcagctattggttgatagcaaccggatacctgaggctgcttttatggctaga
tcttatctgccaagtaaggtttctgaaatagttgcaatttggaggaaggatctcagtaag
gttaaccagaaagcagcagaagctttggctgatcctgaagaatatcctaatctgtttgag
aactggcaagttgcatgtgctgttgaagctagagttgcagaggaaaggggtggctacaca
ccagcaactgagtatgtaaatcatgctgatagatcaactaacaaccttgtagaggctttc
aacaacatgagaatggatgaagatccacttgaaaatggagatacggaccacgaggttgca
caacagagtggtgatgaggtacaagaattggaggcagatgatgcacaaaatgaggaacaa
gaagagggccaagaagaggctgtggtcgtggatgccgactctaatgacggtgcagtactc
attaatggaaacgaggcagacgaagagtggggtacgaatagtgaaggaaaaccgtcagcc
taa
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