KEGG   Nicotiana attenuata (coyote tobacco): 109224039
Entry
109224039         CDS       T05870                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 36
  KO
K12190  ESCRT-II complex subunit VPS36
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:nau00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109224039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nau04131]
    109224039
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nau04147]
    109224039
Membrane trafficking [BR:nau04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    109224039
Exosome [BR:nau04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109224039
  Exosomal proteins of colorectal cancer cells
   109224039
SSDB
Motif
Pfam: EAP30 Vps36_ESCRT-II DUF4512 MKT1_C HTH_10
Other DBs
NCBI-GeneID: 109224039
NCBI-ProteinID: XP_019244127
UniProt: A0A1J6JLH7
LinkDB
Position
1:32191951..32198203
AA seq 433 aa
MAGNWLPAAKLTGSGRPVLEPGEVECSLLSSADLLSEENPNFPHLKSGLLILTTHRLIWV
QESSTTSPPIAVFIPLSGVTHIFPLKKSIKSMFASPRFRFQASLKGTMVVITLIFRGKSD
IDSFLEKFWEAWRRKGWEDGVVKSGPEASGSGHVSGGNGGFAVRMPVVGVAGILRKEQEM
WENTDKSLQDAFQDLNALMGKAKEMVILAERMRTKLLSGSTSQATGTNDEEIGTKEEMQE
LLLSVGIVSPVTKESAGALYHQQLSRQLADFVKIPLERSGGMINLIDIYCLFNRARGTEL
ISPDDLLRACSLWEKFDVPVMLRKFDSDVMVIQSKSHSDDEVFTRIRSLVTTPDTLRAGI
TASDAAMTLGIAPAMAKEHLLAAEAKGLLCRDVSPDGFRFFVNLLQEIDADDIFLVKEYG
IYHTWIKAISAAR
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggccgggaattggctaccggcggcaaagctaaccggaagtgggcggccggtgcttgaa
ccaggcgaagtagagtgcagccttctctcctccgcagacctcctttctgaagaaaaccca
aacttccctcaccttaaatcgggcctcctcattctcacaactcaccgtcttatttgggta
caagaatcatccaccacctcccctcctattgccgtattcatccctctttcaggcgtcact
cacatcttccccctcaaaaaatctatcaagtcaatgtttgcaagccctagattccgattt
caggcttcacttaaagggacgatggttgtaattactttgatttttaggggtaaatcggac
attgattcgtttttagagaagttttgggaagcatggagaaggaaaggttgggaagatggg
gtagtaaaatctgggccggaggcttcgggttcgggtcatgtgtcgggtggtaatggagga
tttgcagtgaggatgccggttgttggtgtagctgggatattgaggaaagagcaggagatg
tgggagaatactgataagagcttgcaggatgcttttcaggatttgaatgctctcatgggt
aaggctaaagaaatggtgatactagctgagagaatgagaacaaagcttctctctggctca
actagtcaggccactggcacaaatgatgaggaaattggcaccaaagaagagatgcaagaa
ttactattaagtgttggtattgtgtctccagttactaaagaatctgctggtgctttgtat
catcaacaattatctcggcagttggcagattttgtcaaaattccactggagagatctgga
ggaatgattaatctcattgacatctattgccttttcaatcgggctcgtggaacagaattg
atatcacccgacgatttgctgcgtgcttgttctctctgggagaagtttgacgtaccagtt
atgcttcggaagtttgatagtgatgtcatggtcatccagagcaaaagccacagtgatgat
gaggtatttactagaataagatctttggttaccacaccggacactttacgagcagggatc
actgctagtgatgctgcaatgactctgggaattgctccagctatggccaaagagcacctt
cttgcagccgaggccaaaggacttctgtgtagagatgttagtccagatggattccgcttt
ttcgtcaatttgttgcaagaaattgatgctgatgatatattcttagtgaaagaatatgga
atctatcatacatggatcaaagctatctctgctgccaggtga

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