Nicotiana attenuata (coyote tobacco): 109224039
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Entry
109224039 CDS
T05870
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109224039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109224039
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nau04147
]
109224039
Membrane trafficking [BR:
nau04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
109224039
Exosome [BR:
nau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109224039
Exosomal proteins of colorectal cancer cells
109224039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
DUF4512
MKT1_C
HTH_10
Motif
Other DBs
NCBI-GeneID:
109224039
NCBI-ProteinID:
XP_019244127
UniProt:
A0A1J6JLH7
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Position
1:32191951..32198203
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AA seq
433 aa
AA seq
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MAGNWLPAAKLTGSGRPVLEPGEVECSLLSSADLLSEENPNFPHLKSGLLILTTHRLIWV
QESSTTSPPIAVFIPLSGVTHIFPLKKSIKSMFASPRFRFQASLKGTMVVITLIFRGKSD
IDSFLEKFWEAWRRKGWEDGVVKSGPEASGSGHVSGGNGGFAVRMPVVGVAGILRKEQEM
WENTDKSLQDAFQDLNALMGKAKEMVILAERMRTKLLSGSTSQATGTNDEEIGTKEEMQE
LLLSVGIVSPVTKESAGALYHQQLSRQLADFVKIPLERSGGMINLIDIYCLFNRARGTEL
ISPDDLLRACSLWEKFDVPVMLRKFDSDVMVIQSKSHSDDEVFTRIRSLVTTPDTLRAGI
TASDAAMTLGIAPAMAKEHLLAAEAKGLLCRDVSPDGFRFFVNLLQEIDADDIFLVKEYG
IYHTWIKAISAAR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaattggctaccggcggcaaagctaaccggaagtgggcggccggtgcttgaa
ccaggcgaagtagagtgcagccttctctcctccgcagacctcctttctgaagaaaaccca
aacttccctcaccttaaatcgggcctcctcattctcacaactcaccgtcttatttgggta
caagaatcatccaccacctcccctcctattgccgtattcatccctctttcaggcgtcact
cacatcttccccctcaaaaaatctatcaagtcaatgtttgcaagccctagattccgattt
caggcttcacttaaagggacgatggttgtaattactttgatttttaggggtaaatcggac
attgattcgtttttagagaagttttgggaagcatggagaaggaaaggttgggaagatggg
gtagtaaaatctgggccggaggcttcgggttcgggtcatgtgtcgggtggtaatggagga
tttgcagtgaggatgccggttgttggtgtagctgggatattgaggaaagagcaggagatg
tgggagaatactgataagagcttgcaggatgcttttcaggatttgaatgctctcatgggt
aaggctaaagaaatggtgatactagctgagagaatgagaacaaagcttctctctggctca
actagtcaggccactggcacaaatgatgaggaaattggcaccaaagaagagatgcaagaa
ttactattaagtgttggtattgtgtctccagttactaaagaatctgctggtgctttgtat
catcaacaattatctcggcagttggcagattttgtcaaaattccactggagagatctgga
ggaatgattaatctcattgacatctattgccttttcaatcgggctcgtggaacagaattg
atatcacccgacgatttgctgcgtgcttgttctctctgggagaagtttgacgtaccagtt
atgcttcggaagtttgatagtgatgtcatggtcatccagagcaaaagccacagtgatgat
gaggtatttactagaataagatctttggttaccacaccggacactttacgagcagggatc
actgctagtgatgctgcaatgactctgggaattgctccagctatggccaaagagcacctt
cttgcagccgaggccaaaggacttctgtgtagagatgttagtccagatggattccgcttt
ttcgtcaatttgttgcaagaaattgatgctgatgatatattcttagtgaaagaatatgga
atctatcatacatggatcaaagctatctctgctgccaggtga
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