Nicotiana attenuata (coyote tobacco): 109224634
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Entry
109224634 CDS
T05870
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109224634
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
109224634
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
109224634
NCBI-ProteinID:
XP_019244718
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All DBs
Position
3:47125028..47127215
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AA seq
329 aa
AA seq
DB search
MVYAANFIGPCSGSMTFQIQGVVKAPTDPSLFCNSTWISFQHVDGLEIEGGGTLDGQGAS
AWPYFDTSKNSNCPTLPITLKLDSVKNAAVHDIHSINSKSFHFGVFMCNNVTFSHVNITA
PGDSPNTDGIHMSVSTNIQVLDSNIGTGDDCISMINGSQSINISGITCGPGHGISIGSLG
KIQNEVVTDIHVKNCTFTATQNGARIKTWAPSESGSATSINFEDIFMDNAKNPIIIDQHY
CPSPPCSSQASSVQIKDVTFNNIRGTSSSAEAVTLNCSASFPCEGINLNEINLVYNGAGG
PAISSCDNAHGTATGMELPPSCLKSSLDS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggtatatgctgcaaattttattggaccatgcagtggatccatgaccttccaaatccaa
ggggttgttaaagctccaacagatccttctctattctgcaattcgacttggatttccttt
caacatgtggatggcttagagattgaaggaggcggaactttagatggacaaggggcttca
gcttggccttattttgatacttccaagaattctaactgcccaacccttcctatcacactg
aaattagattctgtcaaaaatgcggcggtgcacgacatacactcaatcaacagcaagagt
ttccattttggcgtctttatgtgcaataacgtgacatttagtcatgttaacataaccgca
ccaggcgacagccctaacaccgacggcattcacatgagcgtctccaccaacattcaagtt
ttggattccaacattggtactggagacgattgtatatctatgatcaatggcagccaaagc
atcaacatttcagggatcacttgtggccctggccatggaataagcatcggaagcttaggg
aaaatacaaaatgaagtcgtcacggatatacacgtcaaaaattgcactttcactgctact
caaaatggcgccaggattaagacttgggcaccatcggagtctggtagtgccacaagtata
aattttgaggatattttcatggataatgctaaaaatcctatcattattgatcagcattat
tgtccatcgcctccttgcagtagtcaggcgagctcagtgcaaatcaaagacgtgacattc
aataacataagaggaacttcaagttcggcggaagctgttactttgaattgtagtgcttca
tttccttgcgagggaatcaaccttaatgaaatcaatttggtatacaatggcgctggtgga
cccgctatctcgtcgtgtgataatgcccacgggacagccaccggcatggagttgcctcca
agttgtttaaaatcgtctctggactcatga
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