Nicotiana attenuata (coyote tobacco): 109225322
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Entry
109225322 CDS
T05870
Name
(RefSeq) alpha-L-arabinofuranosidase 1-like isoform X1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00520
Amino sugar and nucleotide sugar metabolism
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
109225322
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
109225322
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GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
109225322
NCBI-ProteinID:
XP_019245489
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Position
5:12652863..12662410
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AA seq
673 aa
AA seq
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MGSRHSLYHVLLLILCGLSALCQCSATGVEANQTAVLFVNASEASARKIPDTLFGIFFEE
INHAGAGGLWAELVSNRGFEAGGPNVPSNIDPWSIIGDESSVIVSTDRSSCFDRNKVALR
MQVLCDHRGTNICPDGGVGIYNPGFWGMNVEQGKSYKLVLYVRSQESINISVALTGSNGL
QKLATSNIVRAADISSWKKVEILLEAKGTDPNSRLELRSTTKGVIWFDQVSLMPTDTYKG
HGFRQDLFGMLKDLKPAFIRFPGGCFVEGDYLRNAFRWKETIGQWEERPGHFGDVWNYWT
DDGLGHFEFLQLAEDLGARPVWVFNNGVSHHDEVDTSAILPFVQEILDGLEFARGDPTST
WGSVRAKMGHPEPFDLKYVAIGNEDCGKSKYRGNYLKFYSAIKDAYPDIRIISNCDGSSS
PLDHPADLYDFHIYSSASSVFSNARHFDSTRRSGPKAFISEYAVTGNDAGKGSLLAALAE
AGFLIGVEKNSEAIEMASYAPLFVNDNDRRWNPDAIVFTSSQMYGTPSYWMQHFFKESNG
ATLLSSSLQANPSNSLIASAITWRNSDDNNEYLRIKVVNFGTTAVALKISISGLDQNTLE
SSGAIKTTLTSTNVMDENSFKEPNKVSPVKAMLEKVSESMDVVLSPRSLTSFDLLRKSIS
SSVDTASALISSY
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgaggcattccctttatcacgtacttcttttaattttgtgcggtctgtctgcc
ctgtgtcaatgttcggctactggggttgaagcaaaccagacagcggtattgtttgtgaat
gcatctgaagcatcagcaaggaaaatacctgatactctttttggtatattctttgaggag
atcaatcatgctggagctggtggattgtgggctgagcttgtcagcaacagaggttttgaa
gctggaggcccaaatgtaccttcgaatatcgatccttggtccatcatcggggatgagtcc
tcagtgattgtctcaacagatcgttcatcatgctttgatcggaataaagttgcacttcga
atgcaggtgctttgtgaccatagaggcaccaatatctgtccggacggtggagttggtatc
tacaaccctggtttttggggcatgaatgttgagcagggaaagagttacaaactagtgctt
tatgttcgttcacaagaatcaatcaatatatctgtcgctttaactggttcaaatggattg
caaaagttggctacttccaacatagtcagagctgccgatatttcaagttggaaaaaagtg
gaaatcctgttagaagcaaaaggaacagatcccaattcaagactcgaattgagatcaaca
acaaaaggtgttatatggtttgatcaagtatcattgatgcctacagacacatataagggc
catggcttcaggcaagatctttttggaatgcttaaagatttgaaaccagcattcattaga
tttccaggtggatgttttgttgaaggtgactatttaagaaatgcatttaggtggaaagaa
accattggacagtgggaagagaggcccgggcactttggtgatgtttggaattactggact
gatgatgggcttggccattttgagttcctgcagcttgccgaggacttaggtgcacgacct
gtgtgggttttcaacaacggagtcagccaccatgatgaagttgacacttccgctattttg
ccttttgtgcaagaaatcttagatggtcttgagtttgcaagaggtgatcctacctcaaca
tggggttctgtgcgagccaaaatgggacatccggagccctttgatttgaaatatgtggcg
attggaaatgaggattgtggaaagtcaaaataccgtggaaattacctcaagttctattca
gccatcaaagatgcatacccagatattaggataatctcaaactgtgacggttcttccagt
ccactggatcacccagccgatttatatgattttcatatttatagcagcgcaagttctgta
ttttctaatgctcgccattttgatagtacacgacgcagtggaccaaaggcttttataagt
gagtatgctgtgactggaaatgatgctggtaaaggtagtcttttagcagcattggctgaa
gctggattcctcattggggtagaaaagaacagcgaagcaattgaaatggcaagttatgca
cccctatttgttaatgacaacgacaggaggtggaacccagatgcaattgtcttcacctct
tcacaaatgtatggaacaccaagttattggatgcagcatttcttcaaagagtcaaatggc
gcaactcttctgagttcatcacttcaagctaatccttcaaattcacttatagcatctgcc
atcacttggcgaaattcagatgataacaatgagtatttgagaataaaggtcgtgaacttt
gggaccaccgccgttgctcttaaaatctctatcagcggattggatcagaacactttagag
tcatctggagcaataaaaactacattaacatccaccaatgtgatggatgaaaattccttc
aaagagcctaataaggtatcaccagttaaagcgatgcttgaaaaagttagcgagagcatg
gatgttgtactgtctccacgttccctcacttcatttgacttgttaagaaaatcaatcagc
agtagtgttgatactgcttctgcccttatatcttcatactaa
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