Nicotiana attenuata (coyote tobacco): 109225336
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Entry
109225336 CDS
T05870
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nau03016
]
109225336
Transfer RNA biogenesis [BR:
nau03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
109225336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_THOC3
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
109225336
NCBI-ProteinID:
XP_019245504
UniProt:
A0A1J6IE91
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All DBs
Position
5:complement(13367839..13378999)
Genome browser
AA seq
1316 aa
AA seq
DB search
MKNLKILKEQLSKIQLNSEDEVISFAAFDVEHNRLFLASSSNFIYSLLLPSPHQNAGAWN
SISDNLIDLEPGDFITSMDYLMEKEALIIGTSYGLLLLYTADDNTTEIVGRVEGGVKCVS
PSPDGDLLGVITGFGQILMMTPDWDVLYEMALDDLPEDIDVHEHTYSSNYSSESSVSWRG
DGKYFATLSRVNNSHLSHKKLKIWERDSGALHSVSESKPFMGSTLDWMPSGAKIAAVYDR
KEDRKCPSIVFFERNGLERSSFCLNVEVDATVEFVKWNCNSDLLAAVVRGEKYDSLRIWF
LSNNHWYLKQEIRYMKDDRVRFMWDPIKPQELISWTVGGDITTYNFVWITAVMNNSVALV
IDDSKILITPLSLSLIPPPMYLFCLKFPSAIQSMAFCSKSSLKHLAASLSDGRLCVVELP
AIDCWEELEGKEFDVEAASFDSGDRSFIHLAWLDSHKLLGVSHSQISNSAIKESSKDEHS
IYCLHEIELVCSEDRISSSVTCSGWHAKVLNRLSLEGTVIGIVPDQGNGCSAYVQFDGGK
VFEYALKVADARGLHRKRDDMSFSSSCPWMDLVQIGGCLPQKALLFGLDDSGRLLVGERT
LCNNCSSFSFYSNSADYTVTHLILATKQDLLFIIDISDILKGELEVKYGNFLAVFKHKKG
EDERNYIQIWERGAKIVGVLHGDESAIILQTVRGNLECIYPRKLVLASIINALIQGRYKD
ALLMVRRHRIDFNVIIDHCGWQNFVQSAAEFVKQVNNLSYITEFVCSIKNEKIMETLYKN
YRSLPHDNEAKAVEHGDLESSHGNSKIHSVLLAIRKALEEHVAESPARELCILTTLARSD
PPALEKALERIKIIREKELSGSDDLRRELYPSAEEALKHLLWLSDSEAVFEAALGLYDLN
LAAIVALNSQKDPKEFLPYLQELENMPIVLMQYNIDLRLQRFETALQHIVSAGDAYFEDC
MILMKKNPHLFPLGLQLVTDSVKKNQVLEAWGDHLSSRKCFEDAATTYLCCSCLNKALKA
YRECGNWGGVLTVAGLIKLGKEEVLQLAHELCEELQALGKTGDAAKIALDYCADVNAGTG
FLVSAREWEEALRTAFLHRRDDLVQEVRTASLECASSLVGEYEEGLEKVGKYLTRYLAVR
QRRLLLAAKLQLDERSINELDDDTASETSSNFSGMSAYTLGTRKGSAASIKSSASTKARD
MRRQRNRGKIRAGSPGEEIALVEHLKGMSLTTGAKRELKSLLICLVMLGKEDIARKLQHV
ATNFQLSQMAAVNLADEALSNDRINEHFYVLENYIPKIKEEMQHSELFSWQSKVLI
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatctgaagatattgaaggagcaattgtcgaagattcagttaaattccgaggat
gaagttatcagcttcgcagcatttgacgtggagcacaatcgcctcttcttagcttcctct
tccaacttcatatacagtttacttctgccttctcctcatcagaatgcaggagcttggaat
tccatatcagataaccttattgacttagagcctggggatttcattacttccatggattat
ctaatggaaaaagaagcattgattattgggacttcatatggtcttctattgctatatact
gcggatgataatacgacagaaattgttggccgagtggagggtggagtaaagtgtgtatca
cctagtccagatggagatcttcttggtgtaattactggttttggacaaattctcatgatg
acaccagactgggatgttttatatgagatggcactggatgatctgcctgaagatattgac
gtacatgagcatacttactcttccaattattcgtcggagagctcagtttcatggagaggt
gatggcaaatactttgcaacgttaagcagggtgaataattctcatctctcccataagaag
cttaaaatctgggaacgggactcgggggcactccattctgtttcagaatcaaagcctttc
atgggttcaactttggattggatgcccagtggagccaaaattgctgcagtttatgaccga
aaggaagatagaaaatgcccatctatagttttctttgagaggaatggattagaaagaagc
tcattttgcctcaatgtagaagttgatgctactgtagaatttgtgaagtggaattgtaac
tcagaccttctagctgctgtggtcagaggtgaaaagtacgactctctgaggatctggttc
ttaagtaacaatcactggtacttaaagcaagaaatcagatacatgaaggatgatagagtc
agattcatgtgggatccgataaagcctcaagagttaatttcttggactgttggtggggat
atcacaacctacaacttcgtctggattacagctgtcatgaataactcagtggcacttgta
attgatgactccaagatactaataacccctctttctttatctctcatcccaccacctatg
tacctcttttgtttgaaatttccctctgccattcagagtatggcattttgctctaaaagt
tctttgaaacatctggctgcatccttgtcagatggcagattatgtgttgtagagcttcct
gctattgattgttgggaggagctagaaggtaaagaatttgatgttgaggctgcttctttt
gattcaggagatagatctttcattcacctagcatggttggattcacataagcttcttggt
gttagccatagtcaaattagcaactcagcaataaaagagtcctctaaggatgagcattct
atatattgcctccatgaaattgagcttgtatgttctgaagatcgtatttctagttcagtg
acatgctctggttggcatgctaaagttttgaatagattatctcttgaaggtacagtaatt
ggtatagttcctgaccagggaaatggctgctcagcgtatgttcagtttgacggtgggaaa
gtgtttgagtatgctttgaaggtggctgatgccagagggcttcatcggaaacgtgatgat
atgagtttttcttcatcttgcccctggatggatcttgtgcaaattggaggctgtttgccg
cagaaagctttgctttttggtctcgatgacagtggtagattgctcgttggtgaaaggaca
ttgtgcaacaattgcagtagtttttctttctactcgaattctgctgactacactgtcacc
catttgattcttgcaaccaagcaggatttactgtttattattgatattagtgatatcctg
aaaggagaactggaggttaagtatgggaacttcctggcagttttcaagcacaaaaaagga
gaagatgaaagaaactatattcaaatatgggaaagaggtgccaaaattgtaggtgttctt
catggggacgaatctgctatcatacttcaaacagttcgagggaatcttgagtgcatctac
cccagaaaattggtcctcgcttcaataatcaatgctttgatccaggggcgttacaaagat
gcattgctcatggtaagaaggcacagaattgatttcaatgttataattgaccactgtggt
tggcaaaactttgttcagtcagctgctgagtttgtcaagcaggtgaataatctaagttat
ataactgaatttgtctgttcaataaagaacgaaaaaatcatggagacactatacaaaaac
tatagatccctacctcatgacaatgaagctaaagctgtagaacatggagacctcgagagt
tctcatggtaatagcaagatccattctgtcctactggccataaggaaggctctggaggag
catgtagcagaaagtcccgctagagaactctgcattctgaccactttagctcgaagtgac
cctccagctcttgaaaaagctttagagagaataaaaattatccgagaaaaggaattatcg
ggttcagatgacctgagaagggaactctacccttctgccgaggaagctttaaaacatctt
ttgtggttgtccgactcagaggcagtttttgaagctgcattaggactttatgatttgaac
cttgcagctatcgttgccttgaattcgcagaaggatcctaaagaatttcttccctatcta
caagaactagaaaacatgccaatagtgttgatgcaatacaatatagaccttagattgcag
aggttcgagactgcacttcaacacattgtttctgcaggagatgcttactttgaggattgt
atgatcctcatgaagaaaaatccccatcttttccccttgggactccaattagttaccgac
tctgtcaagaaaaaccaagtacttgaagcctggggagatcatcttagttccagaaaatgc
tttgaggatgctgctactacttatttgtgttgttcttgtttgaataaagctttgaaggct
tatcgtgaatgtggtaattggggtggggttctgacggtagctggtctcattaaacttggg
aaggaggaagtgttgcaactagcacatgagctttgtgaggaactccaagcactaggtaaa
acaggggatgctgcaaaaatagctttggattattgcgctgatgttaatgctggtactggt
ttcttggtcagtgcaagggaatgggaagaagctctgaggactgcatttcttcacaggaga
gatgacttggtccaggaagtaaggactgcatcacttgagtgtgccagctcattggttggt
gaatatgaggaagggttggagaaagtggggaagtacttaactcgctatttagcggttcga
caacggagattattacttgctgccaagctacagttagatgagcgatcaataaatgaactt
gatgatgatactgcttctgaaactagtagcaatttcagtggaatgagtgcatacaccttg
gggacaagaaagggatcagctgcatctatcaagtccagtgctagtacaaaagcgagagac
atgagacgtcaacggaatagagggaaaatacgtgctggcagtcctggtgaggagattgct
ttggtagagcatttaaaggggatgtcactgactactggagctaagcgcgagcttaaatct
ctcttgatatgccttgtgatgctgggaaaggaagatattgctaggaagttgcaacatgtt
gctacaaattttcaactgtcccaaatggcagctgtaaatttagctgatgaggccttgtca
aatgatagaatcaatgagcatttctatgttctggagaattacatccccaaaataaaggaa
gaaatgcagcattcagagcttttctcctggcagtcaaaagtattaatttga
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