Nicotiana attenuata (coyote tobacco): 109225384
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Entry
109225384 CDS
T05870
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109225384
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nau01002
]
109225384
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109225384
Enzymes [BR:
nau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109225384
Peptidases and inhibitors [BR:
nau01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109225384
Ubiquitin system [BR:
nau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109225384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
SASP
DGCcoil
CMAS
Motif
Other DBs
NCBI-GeneID:
109225384
NCBI-ProteinID:
XP_019245565
UniProt:
A0A1J6IF56
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All DBs
Position
5:complement(15504317..15517749)
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AA seq
546 aa
AA seq
DB search
MTLLTPHLVGITLKKEQKEKEQKRKEKVEDRHYTIIKVARDEDLAEQIGKEMYFDLVDHD
KVHAFHIQKQMPFTQFKDVVAKVFRIPVQFQRYWLWAKRQNHTYRPDRALTVQDEVQSVG
QLREGNTAELKLFLEVELCLDLRPFPPPEKTKEDILLFFKFYDPLKEKIRYVGRLLVKES
GKPLEILTKINEMVGFSPDEKIELFEEIKFEPNVMCKRIDSKRSFRDCEIGDGDIICFQK
SLQNQCSEQYRFPQVPSFLEYMHSLQIKLNKEQEEQEQKKKEKAEAHLYKIIKVARDEDL
GEQIGKEIYFDLVDHNKVHSFRIRKQMPFTQFKEEVAKEFGIPVQFQRYWLWAKRQNHTY
RPIRPLTAQEEIQSVDQLREVSDKGNSAELKLFLEVDLCLDMRPFAPPGTTKEEILLFFK
LYDPLKEKIRYVGRLFVKGSGTPLEMLTKLNELAGFSPDEEIELFEEIKFEPNVMCEHID
STLSFRGSQLGDGDIICFQKSLRNQDSDQYRFPEVPLFLEYVHDLQVIKDRFPRIQSLET
YFQGRK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgactctactcactcctcatctggtgggaataacactgaagaaagagcaaaaagagaag
gaacaaaagagaaaggagaaagtagaagatcgccactacacaatcatcaaggtagctcgt
gatgaagacctcgctgaacaaattggaaaggagatgtattttgatcttgtggatcatgat
aaagtgcatgcttttcatattcagaaacagatgccatttactcaattcaaggatgtagta
gctaaggtatttcgtataccggtacaatttcaacgttactggctatgggcaaaacgtcag
aaccatacttatcggcctgatcgtgcattgacagttcaagatgaagttcaatccgttggt
caattgagagaaggaaatactgctgagctaaaactgtttctggaagtagaattatgcctg
gatttgcgaccttttcctccacctgagaagaccaaggaagatatccttctatttttcaaa
ttttatgaccctctgaaagagaagataaggtatgtcggacggcttcttgtaaaagaaagt
ggcaagccgctggagatattaacaaagattaatgagatggttggcttttcgcctgatgaa
aaaattgaactttttgaggaaataaaatttgaacccaacgttatgtgtaaacgcattgac
agtaagcggagttttcgtgactgtgagataggagacggggatataatttgctttcagaaa
tcccttcaaaatcaatgcagtgaacaataccgctttcctcaggttccttcatttttggag
tacatgcacagtctccagataaaactaaataaagagcaagaagaacaggaacagaagaaa
aaggaaaaagcagaagctcatctctacaaaatcatcaaggtagctcgtgatgaagacctc
ggtgaacagatcggaaaggagatttattttgatcttgtggatcataataaagtgcacagt
tttcgtatccggaaacagatgccttttactcaattcaaggaggaagttgctaaggaattt
ggtatcccggtgcaatttcaacgttattggctatgggcaaaacgccaaaaccatacatat
cgtcctattcgtccattgacagctcaagaagaaattcaatccgttgatcaactgagagag
gtttcagataaagggaatagtgctgaactaaaactgtttctggaagtggatttatgcctg
gatatgcgaccttttgctccaccagggacgaccaaggaagaaatccttctattttttaaa
ctttatgaccctctgaaagagaagataaggtatgttggacggctttttgtaaaaggaagt
ggcacgccgctggagatgttaacgaagctaaatgagttggctggcttttcgcctgatgaa
gaaattgaactatttgaggaaataaaatttgaacccaatgtgatgtgcgaacacattgac
agtactctgagttttcgcggtagtcagctcggagatggggatattatttgctttcagaaa
tcccttcgaaatcaagacagtgaccaatatcgctttcctgaggttcctttgtttttggag
tacgtgcacgatctccaggttattaaagacagattccctcgaatccaatccttagagacg
tactttcagggaaggaaatga
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