Nicotiana attenuata (coyote tobacco): 109225395
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Entry
109225395 CDS
T05870
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109225395
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109225395
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
109225395
NCBI-ProteinID:
XP_019245585
UniProt:
A0A1J6IRU0
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Position
5:complement(16113482..16117647)
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AA seq
495 aa
AA seq
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MLSNTCILFFFFFFFLTLSPLIIATFNLTLPFQHPFPEDVVQEVKRRVNESVARRQILDT
TVTNFQCFTGNPIDDCWKCDPNWANNRQHLADCAIGFGHGAVGGKGGRYYLVTDPSDLDT
VNPTPGTLRHAVIQDEPLWITFAGDMIITLKHELMINNYKTIDGRGANVHITGGGCITLQ
YVSNVIIHNIHIYNCVPSGNSNIRQSTTEVGWRGMSDGDGISIYSSRNIWIDHCALSHCT
DGLIDAIMGSTAITISNSYFTHHDKVMLLGHDDRYLPDFGMQVTIAFNHFGQGLVQRMPR
CRRGYIHVVNNDFTEWQMYAIGGSANPTINSQGNRFTAPEDPNAKEVTKRVDTDEKDWTQ
WNWRTEGDEMVNGAYFVPSGDGLSNQYALASSMEPKSAFLIDQLTMNAGVLGVPRDTTVA
MSYGGRTRTTVGTNQGGGARSNDGDSDFLEKVFGSVASAGSSSPPSTTTILMSLLILYVT
TNNGGLLTKPLILLL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgctttctaatacttgcattctctttttcttcttcttcttcttcttaaccttatctcct
cttattatagctacctttaatcttactcttccttttcaacacccctttcctgaagatgtt
gttcaagaagtaaagaggagggtcaatgaatccgttgcaagaagacaaatactcgatacc
acagtaacaaatttccaatgttttacgggcaatccaatagacgattgctggaagtgcgac
ccaaactgggccaacaaccgccagcatctcgccgactgtgccattgggttcggtcacggt
gcagtaggaggaaaaggcggtcggtattacctagtcaccgatccctcagacttagacacc
gtgaacccaaccccaggtactctccggcacgcggtgatccaggatgaacctctgtggatc
acctttgccggagacatgatcataacactaaaacatgaactcatgataaataattacaaa
accatcgatggccgcggcgcgaacgtgcatattacaggaggtggatgtataacgttacaa
tatgtatcaaatgtgatcatacataatatacatatatacaactgtgttccatctggaaat
agtaatataaggcaaagtacaactgaagttggatggagaggcatgtcagatggtgatgga
atttccatatatagttcgaggaatatttggattgatcattgtgctttgtctcattgtact
gatggcttaattgatgcaattatgggatctactgctattactatatctaatagctatttc
actcaccatgataaagttatgcttttgggacatgatgatcgttacttgcctgatttcggc
atgcaggtgacaatagcctttaatcattttggacaaggactggtacagagaatgccaagg
tgtagaagaggttatatacatgtagtcaacaatgattttacagaatggcaaatgtatgca
attggtggtagcgctaatcccaccattaacagtcagggcaaccgttttactgcacctgag
gaccctaatgccaaggaggtgacgaagcgagttgacacagacgagaaagattggactcag
tggaactggaggaccgaaggggacgaaatggtaaatggagcatattttgttccttcaggt
gatggacttagtaaccaatatgcattggcatcaagtatggagcctaaatctgcttttctc
attgatcaactcactatgaatgctggtgtccttggtgtccccagggataccactgtggcc
atgtcatatggtggaagaaccagaaccaccgtcggaaccaaccagggtggcggagctagg
tctaatgacggtgatagcgacttcttagaaaaggtatttgggagcgttgcatcggcagga
tcatcatcaccaccttcaaccactaccatcttgatgtctcttctaattttgtatgttacc
accaacaatggtggcctattgacaaagccattaatactgttactatag
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