Nicotiana attenuata (coyote tobacco): 109225397
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Entry
109225397 CDS
T05870
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109225397
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nau01009
]
109225397
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109225397
03036 Chromosome and associated proteins [BR:
nau03036
]
109225397
Protein phosphatases and associated proteins [BR:
nau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109225397
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109225397
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109225397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Herpes_glycop_H
Motif
Other DBs
NCBI-GeneID:
109225397
NCBI-ProteinID:
XP_019245586
UniProt:
A0A1J6J059
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All DBs
Position
5:16107504..16112954
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AA seq
475 aa
AA seq
DB search
MFKIIKRGKKSSKGDAVEPPIPTSLPNVTADHASRIATSAVTSQPVTLANATPDPSVVEV
LPLLKEVALSDRHVLFIRKLQICCVQFDFSDTVKCARQKEIKRQTLTELIDLVQSGSCKM
NEIMQEELVRMISTNLFRCLPPASHENTGSEGVEEEDEMYLDPSWPHLQLVYELLLRYVM
SSEMDTKVAKRYLDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRNAINN
VFYRFIFETERHNGIGELLEILGSVINGFALPMKEEHKLFLVRALIPLHKPKCVSAYHHQ
LSYCIAQFVEKDYRLADIVIRGLLKYWPITNCGKEVLFLNELEEVLEGTQPAEFQRCLVP
LFKQLGRSINSPHFQVAERALFLWNNEHIVDLIAQNRRAILPIIFEPLERNMFGHWNQAV
HGLTSNVRRMFLEMDSELFEECEKQHNERAAGASGVVEQRELTWKKLEEAAELIR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagataataaaaagagggaagaaaagctcgaaaggggatgctgtggagcctcca
ataccaacctcattgcctaatgtgactgctgatcacgcttcgcggatagcaacatccgct
gtgacatcacagcctgttactttggcaaatgccacaccagatcctagtgtggttgaagtc
ttgcccttattgaaggaggttgcactttccgaccgccatgttttgttcatccggaagctc
caaatttgctgtgtgcaatttgacttctcggatacggtgaagtgtgctagacaaaaggag
atcaagaggcaaacactcactgagcttattgatttagttcaatcgggctcgtgtaaaatg
aatgaaataatgcaggaagagttagttaggatgatatccaccaatcttttccggtgtctg
cctcctgcttcgcatgagaatactgggtcagaaggtgttgaggaagaggatgaaatgtat
cttgatccgtcatggcctcatttgcaactagtgtatgagttacttttaaggtatgtgatg
tcgtccgaaatggataccaaggttgccaagcgatatcttgaccactcgtttgtgctgaaa
ctgctcgacttgtttgattcagaggatcctagagagcgggagtatttgaagactattctt
caccgcatatatgggaaattcatggttcatcgcccgtttataaggaacgcgataaacaat
gtattctacaggtttatatttgagacggagaggcataatggtatcggtgagctgctagag
attctgggaagtgtaataaatgggtttgccctgccaatgaaagaagagcataagttgttt
cttgttcgggcgcttattcctctccacaagcctaaatgtgtttctgcatatcaccatcag
ctgtcctactgcattgctcagtttgttgagaaagattacagattggcagatatcgtcatc
agagggctgctaaaatactggccaattactaattgcggaaaggaggttctctttcttaat
gaactagaagaagtactggaaggtacacagccagctgaatttcagcgttgtttggttcct
cttttcaagcaacttggacgaagcatcaatagtccccattttcaggttgctgagagagct
cttttcttatggaacaatgagcatatagtagacttgatcgcgcagaatcgacgtgcaatt
ttgccaattatctttgagccattagaaagaaatatgtttggtcactggaatcaggcagtc
cacgggctgacctccaatgtccggagaatgttcttggagatggattcagaacttttcgaa
gagtgtgaaaagcaacacaatgaaagagcagccggtgccagcggagttgtggagcagcgc
gagctgacttggaagaaattggaagaagctgcggagctgatcaggtag
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