Nicotiana attenuata (coyote tobacco): 109225546
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Entry
109225546 CDS
T05870
Name
(RefSeq) uncharacterized protein LOC109225546
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109225546
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109225546
Surveillance factors
Other surveillance factors
109225546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
109225546
NCBI-ProteinID:
XP_019245797
UniProt:
A0A1J6IEI2
LinkDB
All DBs
Position
5:complement(26185991..26194889)
Genome browser
AA seq
1550 aa
AA seq
DB search
MAEGKLDLPDDLLSSNPSDHSKGNDDSKPFMVQLDISKDQAMVDSSIPLSPQWLYAKPSD
TKMEMRPPSSLSLGSSADSSQKEAWRTDMPEDKKDWRRTPVETESGRRWREEERETSLLG
RRERKKTDRDVNNRNSGLDTRRDSKWSSRWGPDGKEKENRSEKRIDVDKEDVHHDGQPFL
ANRSVSERESDSRDKWRPRHRMEGNSAATGSYRAAPGFGQERGKVEGSNVGFNLGRGRST
VTIVRPSSGGAIGASPFENSVAGKPSISAGIFCYPRGKTLDIYRMQKLGSSLCSMPENME
EEPPVTQVIAIEPLAFVVPDAEEEAVLNDIWKGKITGSGVSYNPSRKGQSIDDVTETGDT
EPNNPKQGAPSADVTEETADRLLKTSKGVEEANAYSFSYENGVKVRLDGGDNHEGQKEKV
SESITADERLLTRKRTVNNDCLKVISGSKSDTSEVSLPESGVTMAPVFENIQQHVAFDVS
SKVPDDSNSLFAKSSSEIYWNNLLGRGTPPEELSLYYRDPQGEIQGPFLGADIISWFDQG
FFGTDLPVRLEDAPEDSPFFELGDIMPHLKFGHEYVGDINLPQVEPSAVLEGKLDSGLHC
SASVSEMVGSAALDGLSWPASDFDGQNGLGGHRNQSVPDHPARQFKPPYLQNEEFHDFVA
QDEEIVFPGRPGSSGNPIGKTSTGPTDPSNMHRAIPNAMTGGRVPNQEEPLHPLGLLWSE
LEGTSGKSGPISDVPFSGGGQDQILNPVAARVAPFGAKMEPASTVETWADAYRRNAVSEP
NLYQDATDASHLLHRDHELNRFELADKLFSQQLQQQHPNSLMSSHNSHLNEAMLEQGANY
NSIHQPQLASQTGQDLEHFMALQLQQQQQRQLQLQQQQLQQQQQFHQQQMLLKEQQSHAR
QLLLEQLLQSQICDSSRAQSRLGSIRHNSALEQVLIKQQILSELQQRSHLPPRHAEPSIE
HLIQAKFGQIPRQGHQNDLMELLSRAKHGQMHPVEHQILQQEQVHERLRQRLEMEEDRQI
GSVWHVDETGQFLRNPAVARRANSGFGPLDIYQQQQIPLPEEHVSHLERNLSVQDRFQRG
LYDSGLLPLERTMSVPGGGPGVNLDAVNPLLHAQGLEMQDPNSRMQSAGHMPGFSTGTHA
QSPHHPLFSNQFHAPNADTIENHWPERNGQLPVDWMETRMQQLHLNGEMQRREFDVKRAS
EDQSMWMSAGASDDSSKRLLMELLQQKSGQQSTEKAEMTRGVLFERGFHSGQFSRTNASN
CSFNPLLDQDTSLNQAFSVGSYGSNSGLPPHRDHVDEIASSLNVGERLPFKSHSGALSEV
EPVFSSINDASQVYLEARESIGGQAGVMTVEGEMPVNLLSRHSSLGTGGGNLDFYNDKSD
RGDSVAEEIPKERMTVTSKRLDNILLKRPPVLRVSSTQEGLSDLTSDTLVRSKNPSDAMA
SEMGKREAGGNAANQVRDTVTSGKKDVRFRRTASCGDADVSETSFSDMLKSNAKKPAAQE
AHASEASDGTQCARSGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIED
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaggaaagctcgatctccctgacgatctcctttcctctaacccttccgatcac
tccaaaggtaacgatgacagcaagcctttcatggtccagcttgatatttccaaagatcaa
gcgatggtggacagcagcattcctttgtctccacagtggctttatgctaaaccaagtgac
acaaagatggaaatgcgtccaccgagctctttgtcacttggaagttctgctgattcaagt
caaaaggaggcttggcgtacagatatgcctgaggacaaaaaggattggagaagaacgcca
gtggagactgagagtggccgccggtggcgtgaggaagagagggaaactagcttgcttggt
cgaagagaacgaaagaaaaccgatcgtgatgttaataaccgcaattctgggcttgataca
agacgtgatagcaagtggtcttctaggtggggtcctgatggcaaagaaaaagaaaatcgc
agtgagaaaaggatagatgtagataaggaagatgttcatcacgatggtcaaccatttctc
gctaaccgttctgtctcggagcgggagtcggattctcgtgataagtggcgtccacgccat
agaatggaaggtaactctgctgctacaggttcctatcgtgctgccccaggctttggacag
gaaagaggaaaagtagaagggtcaaatgtgggatttaacttgggtcgtgggaggtctact
gtgactattgtaagaccttcctctgggggtgcaattggtgcttcgccatttgagaattct
gttgctggaaaaccaagcatctcagctggcatattttgttatccaagggggaaaactctt
gacatataccgcatgcaaaagcttggctcatctctttgtagcatgcctgaaaatatggaa
gaagaacccccagttactcaagtaattgctattgaaccattagcttttgttgttcctgat
gctgaggaggaggctgtcctcaatgacatatggaaaggtaaaattactggtagtggtgtt
tcttacaatccttctagaaagggtcaatcaatagatgatgtcacagaaactggggatacg
gagcccaacaatccaaagcagggtgctccctctgctgatgtcactgaagagacagctgat
aggttactgaaaacatcaaaaggtgttgaagaagccaatgcctatagcttttcttatgag
aatggtgtcaaggtcaggttggatggtggagataatcatgaaggacagaaagagaaagtt
tctgaatctattactgcagatgaaagattgttgaccaggaagagaactgtcaataatgac
tgcttgaaagtcattagtgggtccaaatctgatacttctgaggtcagcttaccagaatca
ggagtaaccatggcccctgtctttgagaacatccaacaacatgttgcctttgatgtcagt
tcaaaggttcctgatgattcaaattccctatttgcaaagtcctcttcagaaatctactgg
aacaaccttctgggaaggggtaccccacctgaggagttgagtttgtattatcgtgatcca
caaggcgaaatccaggggccatttcttggagctgacatcatctcatggtttgaccagggt
ttttttggaactgacttgccagttcggttggaagatgcccctgaagattcacctttcttt
gaactgggggacataatgccgcatttgaaatttggacatgagtatgttggtgacatcaat
cttcctcaggtagaaccatctgctgtactagaggggaagttggactctggtttacattgc
tcagcttctgtttctgagatggttggttctgctgccctggatggcttgagctggccggca
tctgattttgatggccaaaatggccttggtggacatcgtaatcagtcagtacctgatcat
ccagctcgtcaatttaaaccgccttatttacaaaatgaagagtttcatgatttcgttgct
caagacgaagaaattgtgtttccaggaagacctggaagcagtggcaatcctattggaaaa
acttcaacaggacctactgatccttcaaatatgcatcgtgcaattccaaatgcaatgact
gggggtcgagttccaaatcaggaagagccactgcacccacttggtttattatggtcagag
cttgaaggcacttcaggaaagagtggtcctatctcagatgttccatttagtggaggtggt
caggatcagattctaaaccctgttgctgcaagggttgcgccatttggtgctaagatggaa
ccagcctctactgtcgagacatgggctgatgcttatagaagaaatgctgtatcagaaccc
aacttatatcaagatgctacagatgccagccacttgttgcacagggaccacgaactgaac
cggtttgagttggcagataagctgttctcacaacaacttcaacaacagcatcctaatagt
ttgatgtcctctcataatagtcatttaaatgaagcaatgctggaacaaggggcaaactat
aattcaatacaccaaccgcagttggcgagtcagactgggcaggacttggaacactttatg
gctcttcagctgcagcagcagcagcagagacagttacagcttcaacaacaacaactgcaa
caacagcaacagttccatcaacagcaaatgctactgaaagagcaacagtcccatgcaaga
cagctgcttcttgaacaattattgcagagtcaaatatgtgattcaagtcgtgcacaatca
cgtcttggttctattaggcataacagtgctctggagcaggtgttgattaaacagcaaatt
ctgagtgaactgcaacagcgttcacatcttcccccaagacatgctgaaccatctattgag
catctcattcaagcaaaatttggtcaaataccgcgtcaagggcatcaaaatgatttgatg
gagctcctatctcgggcaaagcatggacagatgcaccctgtggagcatcaaatccttcaa
caggaacaagtgcatgagaggctaaggcaacgtttggaaatggaggaagatagacagatt
ggttctgtctggcatgtagatgaaactggtcagtttctccgaaatccagctgttgctcgt
cgagccaactctggatttggcccattagatatttaccaacagcaacagataccccttcct
gaagagcatgtcagtcatctggaaaggaatttgtcagtgcaggatagatttcagcggggt
ctctatgactctggattactgcctttagaacgtacaatgtcagtacctggtggtggtcct
ggtgttaatttggacgctgtaaatcctctattgcatgcacaaggtttagaaatgcaagat
ccaaattcaagaatgcaatcagctggtcatatgcctgggttctcgactggaacccacgcg
caatctcctcaccatcctttgttttccaatcaatttcatgctccgaatgcagatacaatt
gaaaatcattggcctgaaagaaatggtcagttaccagttgattggatggaaactcggatg
cagcaactgcatcttaatggtgagatgcaaagaagggaatttgatgtcaaaagggcttct
gaagatcaaagtatgtggatgtcagctggtgctagtgatgacagttcaaagcgattactt
atggagctgctccagcaaaaatctggccagcagtcaactgagaaagcagaaatgaccagg
ggggttttgtttgagaggggctttcactctggtcagttttccaggacaaatgcttcaaac
tgttcgttcaaccctcttttggaccaggatacgagtctaaaccaagcctttagtgttggg
tcatatggttctaattcaggtttgccaccacatagagatcacgtagatgagattgccagt
agtcttaatgttggtgagagattgcccttcaaatctcattctggagctttatctgaagtt
gaacctgtcttttccagcatcaatgatgcctctcaggtgtatcttgaggctcgagaaagt
atcggtgggcaagctggtgtgatgactgtagagggggaaatgccagttaacttgcttagc
aggcacagttcacttgggactggaggtggaaatcttgacttctacaatgacaagagtgat
agaggggattcggttgcggaggaaattccgaaggaacggatgactgtgacatcaaaaagg
ctggataatatcttgctgaagcgtccacctgtcttacgagtttcttcgacacaggagggt
ctatctgatctaacttctgatacccttgtgagaagcaaaaatccttcagatgccatggct
tctgaaatgggcaagagggaagcgggaggtaatgcagcaaatcaagtccgtgacaccgtg
acatctggaaagaaagatgtgcgcttccgacggactgcatcttgtggtgatgctgatgtt
tcagagacatcattcagtgacatgcttaagagtaacgcaaagaagccagcagctcaggag
gcacatgcatcagaggcatcggatggaacacaatgtgcccgtagtggtaagaagaaagga
aagaaaggaaggcagattgatcctgctcttcttgggttcaaggttacaagcaatcgcatc
atgatgggtgagatacaacggatagaagattag
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integrated database retrieval system
