Nicotiana attenuata (coyote tobacco): 109225591
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Entry
109225591 CDS
T05870
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03440
Homologous recombination
nau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109225591
03460 Fanconi anemia pathway
109225591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nau03032
]
109225591
03400 DNA repair and recombination proteins [BR:
nau03400
]
109225591
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109225591
DNA replication proteins [BR:
nau03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
109225591
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
109225591
Bloom's syndrome complex (BTR)
109225591
FA (Fanconi anemia) pathway
109225591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
109225591
NCBI-ProteinID:
XP_019245855
UniProt:
A0A1J6J8L2
LinkDB
All DBs
Position
5:30857438..30866570
Genome browser
AA seq
726 aa
AA seq
DB search
MKKSPLPLQSNCGPQKQVIGKEALVKLLRWHFGHSNFRGKQLDAIEAVLSGRDCFCLMPT
GGGKSMCYQIPALAKPGIVLVVSPLIALMENQVSALKEKGIPAEFLSSTQTVQVKNKIYE
DLESGKPAVRLLYVTPELIATSGFMSKLTKIHARGLLNLIAIDEAHCISTWGHDFRPSYR
KLSSLRSHLSNIPVLALTATAVPKVQKDVIESLNLQSPLVLKSSFNRPNIYYEVRYKDLL
DDPFDDVCKLLKSCGNVCAIIYCLERTMCDDLATHLTSSSISCAAYHAGLNSKMRSSVLD
DWISSKTQVVVATVAFGMGIDRKDVRVVCHFNIPKSMEGFYQESGRAGRDQLPSRSVLYY
GMDDRRKMEFILRNTKRNKDDSSSLQDKSSKKSLDDFNQMVEYCEGSGCRRKMILESFGE
MVPASLCEKSCDVCKHPNLVTSYLEQLKTATAFRQRTGSSRIYMTSGSSFNAEGQMSEFW
NRDDEASGSEEDISESDDALDAAKNVASSKISAKLKLQDKIDMLQRAEENYYQNKSRDKQ
VNKHDKNAIAETLREAGKQRLLNAIKQNQQLVSDSRIDVDKSAVSLENECYKKYGKSGKS
FYLSQMASTARWLSTAGPTELVNKLGSSTPENVTFTPNCSPALSNPLVPVSPKANDEKVH
DNAGSEDPIRSSASPLHGSASAELPPILSFSQFINSGKAKGNSASVSKRDSPDTGKKNLE
KRMRSQ
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcaccattaccactacaaagtaattgtggacctcagaaacaggtgattggg
aaggaagctttagtcaagcttttgagatggcactttggacattccaatttcagggggaaa
caattggatgctattgaagctgttttatcaggaagggattgcttttgcctcatgccaact
ggtggagggaagtccatgtgctatcagatccccgctttggcaaaaccaggaattgtgctt
gttgttagccctttgatagctctcatggaaaatcaagtgtcagcattgaaagaaaaaggg
attcctgctgaatttctttcatcaacccagacagttcaagtgaaaaataagatatacgag
gacctggaatctgggaagccagctgtaaggttactgtatgtgacaccagaactaattgca
acatccggatttatgtcaaagctgacaaagattcatgccagaggattgctgaatctcatt
gccattgatgaggcacattgcatctctacctggggccatgactttaggcctagctatcgg
aagctttcttccctgagaagtcacctatcaaatataccagtattggctttgacagcaact
gctgtccctaaagttcagaaagatgtcatagaatcattaaatttgcaaagccctctagtc
ctgaaatcgtcgttcaaccggccaaatatctattatgaagttcgctataaagaccttttg
gatgatccatttgatgatgtgtgtaaattactaaaatcttgtggaaatgtttgcgccatt
atttactgcctggaacgtactatgtgtgatgatcttgcgacccatctaaccagcagcagc
atttcttgtgcggcatatcatgctgggttgaacagtaaaatgcggagctctgtcttagat
gactggatttcttcaaaaacacaagtggtggtagcaactgtagcttttgggatgggtata
gatagaaaggatgtcagagttgtctgtcacttcaatattcccaagtcaatggaaggcttc
tatcaagagtcaggtagagctggacgtgatcagttgccttccagaagtgtactgtattat
ggaatggacgaccgtaggaaaatggagtttatcttacgtaatactaaaaggaataaggat
gactcctcaagcttgcaagataaatcctctaagaagtcccttgacgacttcaaccagatg
gttgagtattgtgaagggtctggctgtcgtaggaaaatgatacttgagagctttggagag
atggtacctgcttctttatgtgaaaaatcgtgcgatgtgtgcaagcatcctaatctagtt
acaagttacttggagcaacttaaaactgcaactgcttttcgtcagcgaactggatcttca
agaatatatatgaccagcggttcaagtttcaatgccgaaggacaaatgtcagaattctgg
aatcgtgatgatgaagctagtgggtcagaagaagatatatctgaatccgatgatgctctg
gatgctgcaaagaatgtcgcttcatcaaaaatatctgcaaaactcaagttgcaagataaa
attgatatgctgcagcgtgcagaagagaattattatcagaacaaaagccgtgataagcag
gtcaataaacatgacaagaatgccatagctgaaacactcagggaagcaggcaagcagaga
ttgttaaatgcaataaagcaaaaccagcagctggtcagtgattcaaggattgacgttgat
aaatctgcagtttcccttgaaaatgaatgttataagaagtatgggaaaagtggaaaatct
ttctatttatcacaaatggcaagtacagctcggtggctttctacagcaggtcctacggaa
ttagtcaataagctcggcagctctactcctgagaatgtaactttcacacctaactgctct
ccggcgttatcaaatcctttggtgcctgtatcaccaaaggctaacgacgaaaaagtccat
gacaatgctggatcagaagatccaataaggtcatcagcctcacccctacatggatccgcg
agtgcagagttaccacccatcctgtctttctctcagtttatcaacagcggaaaggcaaag
ggaaacagcgcatcagtctcaaagagggactcaccagatacaggtaaaaagaacttagag
aagaggatgagatctcaatag
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