Nicotiana attenuata (coyote tobacco): 109225741
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Entry
109225741 CDS
T05870
Name
(RefSeq) autophagy-related protein 18d-like
KO
K22991
WD repeat-containing protein 45
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109225741
Membrane trafficking [BR:
nau04131
]
Autophagy
Other autophagy associated proteins
Others
109225741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT140_2nd
Beta-prop_RSE1_2nd
Beta-prop_IFT80_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
109225741
NCBI-ProteinID:
XP_019246056
UniProt:
A0A1J6IT39
LinkDB
All DBs
Position
5:44521264..44526902
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AA seq
416 aa
AA seq
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MTTLSSPTSSTVSPSRGTLSPAAYGTYESPMPRASHSGHSEPEISDNDETELHSVSWNQD
YSCFAAGTSRGFRVYNCDPFKETFRRDLKSGGFGIVEMLFRCNILALVGARTNAQYPPNK
VIIWDDHQSRCIGEFSFRSDVCAVKLRRDCIVVVLEHKIYVYNFMDLKLLHQIETVGNPR
GLCCLSHHLNTSVLACPGVRRGQVRVEHFGLNMTKLIKAHDSQIACLTLTMDGLLLATAS
TRGTLIRLFNTMDGTQLQEVRRGVDKADIYSIALSPNVQWLAVSSDKGTIHVYSLRVRVV
GEDATADSAVRTPTLLCQNSSNSLDALISPSTGANPGSSLSFMKGVLPKYFSSEWSFAQF
HLPECTQYIVAFGSQNTVVTAGTDGSFYRCSFDPVNGGEMVQQEYVRFLKTESRQR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgactactctatcatccccaacgagttcaactgtctcaccatctcgagggacactttca
ccagcagcctatgggacatatgaatcccccatgcccagggcctctcattctggccattct
gaaccagagatcagtgacaatgatgaaacagagctacactccgtgtcatggaatcaagat
tacagttgctttgctgctggcactagccgtggctttcgtgtatataactgtgatcctttc
aaagagactttcagacgtgatctgaaaagtggtgggtttggaatagtagagatgttgttc
cgatgcaacattttagcacttgtcggtgccagaactaacgcccaatacccacctaataaa
gttattatatgggatgatcatcagagccgatgcattggtgaattttcatttaggtctgac
gtttgtgcagtgaaactaagacgggattgtattgttgtagtccttgagcacaagatatat
gtctacaactttatggatctaaagcttcttcatcagatagagactgtgggcaatcccagg
ggactttgctgcctctcacaccatttaaatacatctgtattggcttgcccaggcgttcga
agaggacaggtccgggttgagcattttggcctgaacatgacaaagttgatcaaggcgcat
gattctcagatagcatgcttaaccttgactatggatgggctgcttcttgcaacagcaagc
actcggggaactttgataagactcttcaacaccatggatggaactcagttgcaagaggtg
cgtagaggtgttgacaaagcagatatatatagtattgctctatcaccaaatgtgcagtgg
ttggccgtctctagtgacaaaggtaccatccatgtgtacagcctaagagtacgtgttgtt
ggcgaggatgctacagctgattctgctgttagaactccaacattattgtgtcaaaattca
tcaaattctcttgatgcacttatttctccaagtactggagccaaccctggttcatcattg
tcttttatgaaaggagttctgccaaagtactttagctctgaatggtcatttgctcagttt
cacttgccagaatgtacccagtacattgttgcgtttggttctcagaacactgttgttact
gctggcactgatggaagtttctataggtgcagctttgatcctgtgaatggaggagaaatg
gtacagcaggaatatgtccgctttctgaaaacagagagtaggcagagatag
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