Nicotiana attenuata (coyote tobacco): 109225748
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Entry
109225748 CDS
T05870
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nau03036
]
109225748
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nau04812
]
109225748
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109225748
Cytoskeleton proteins [BR:
nau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
109225748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
TOR1L1_N
PDS5
Cnd1
INTS1_R4
UTP20
Adaptin_N
HEAT_Maestro
MMS19_C
Sec7-like_HUS
Tti2
HEAT_DAAF5
MMS19_N
TPR_TTI1_C
INTS7_N
ARMC9_ARM
Dopey_N
CRM1_C
DUF6279
DUF7217
SEN1_N
Motif
Other DBs
NCBI-GeneID:
109225748
NCBI-ProteinID:
XP_019246068
UniProt:
A0A1J6IRY1
LinkDB
All DBs
Position
1:45030030..45047337
Genome browser
AA seq
1427 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDVCLDLLKDNNFRVSQG
ALQSLDSAAVLSGEHLKLHFNALVPAVVERLGDSKQPVRDAARRLLLTLMQVSSPTIIVE
RAGSHAWMHKSFRVREEFARTVTSAIGLFSATELPLQRAILPPILQMLSDPNPGVRDAAI
SCIEEMYSQAGPQFRDELQRHHLPTMMLKDINARLEKIEPKNRLADGIPRNYSAAEVRPT
SLNPKKSSPKAKSSTREVSLFGGDGDIAEKPVEPIKVYSEKELVREFEKIASTLVPEKDW
SVRIAAMQRIEALVIGGAIDFPCFRGLLKQLVIPLSTQLSDRRSTIVKQACHLLSFLSQE
LLGDFEACAEMFIPVLFKLVVITVLVIAESADTCIKTMLRNCKVARALPRIADCAKNDRN
AVLRARCCEYALLILEHWPDASEIQRSAELYEDLIKCCVADAMGEVRSIARSLYRMFART
WPERSRRLFMSFDPVIQRIINEEDGGTHRRHASPSVRERSSHFSLAPQTSASQIPGYGTS
AIVAMDRTSSLPSGTSLSSGLLLSQTKPVGTGTERSLESVLHASKQKVSAIESLLKGLDI
SERSRSSSLDLGVDPPSSRDPPFPLAVPASNSLANALVDAPSGFFKGNNRNGGLGLSDII
TQIQASKDSAKASYRSSVVHESFSANSYSARRASEKLQDRGFVEDHAEQREGRRLMNSHV
HRQYVESPYKDANFRDYQNNYVPNFQRPLSRKNTAGRMSASKRRSFDDSQLPLGEMSSYV
DGPASLSDALSEGLSPSSDWNARVAAFSYIRSLLQQGPRGIPEIIQSFEKVMKLFFQHLD
DPHHKVAQAALSTLADLIPACRKPFESYMERILPHVFSRLIDPKESVRQPCSTTLEIVSK
TYGIDSLLPALLRSLDEQRSPKAKLAVIEFSIGSFNKHPSNSEGAGNSGILKLWLAKLTP
LVYDKNTKLKEAAISCIISVYTHFDATGVLNFILSLSVEEQNSLRRALKQYTPRIEVDLM
NFLQNKKERQRSKYDLSDVVGTSSEEGYIGASKKSHLFGRYSGGSVDNDGARKWNSVPDS
TYMTSSIGHSLSDDTQDFYRDVETGSNSDLPVSKALALTANQSDGLWDNPQEYNYDSLKM
EHTSTPHLEVNGLVDSEHLGVAVGVGADKESDSGLNHLKLSALKINSTPATGPSIPQILH
TICNGSDESCAANKHGALEQLVEAVANDQSIWNKYFNRILTAVLEVLDDSESSIRELALS
LIVEMLKNQRDAMEDSVEVVIEKLLNATKDVAPKVANEAEHCLTMVLSLYDPFRCLSVVV
PLLVTEDEKTLVTCINCLTKLVGRLSQEELMSQLPSFLPALFDAFGNQSADVRKTVVFCL
VDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGTPIDANRS
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcactggaattggcacgtgccaaggacacgaaggagagaatggcgggcgta
gaacgactccaccaacttctcgaagcttctcgaaaaagcctctcttcttcggaagtcact
tctcttgtggatgtttgcttagatcttctgaaagacaacaactttagggtctctcagggt
gctttacaatcgctcgattccgccgctgtactctccggtgaacacttgaagctccacttc
aatgcacttgtacctgccgtcgttgaaagattaggcgattcgaagcagcccgttagagat
gctgctagacgattgttgcttactttgatgcaggtttcttcaccaactatcattgttgag
agggcagggtctcatgcttggatgcacaaaagcttcagagttcgagaagaatttgctcgc
actgttacatcagcaattggtcttttttcagcaactgagctgccccttcaacgggccatt
cttcctcctattctgcaaatgttgagtgatcctaatcctggtgttagagatgcagccata
tcatgtattgaggagatgtattcacaggctggacctcagttccgtgatgagcttcagcgc
catcatcttcctaccatgatgctaaaagatattaatgccagactagagaagattgagccc
aaaaatcgattagcagatggaattccaagaaactattcagctgctgaggtgagacccacc
agtcttaatcccaagaaaagcagcccgaaggctaaaagttcaacaagagaggtatctctt
tttggaggggatggtgatattgcagaaaaacctgtcgaaccaattaaagtgtactcagag
aaggagctggtaagggaatttgagaagattgcttctacccttgtgccagagaaggattgg
tctgtccgtatcgctgctatgcaaagaattgaagctcttgttattggaggtgcaattgat
tttccttgtttccgtggacttctaaagcaacttgttatccctttgagcacacagttatct
gatcggagatccaccattgtcaaacaggcttgccatttgttaagcttcttatcccaagag
cttttgggagattttgaggcgtgtgccgagatgttcattccagttcttttcaagcttgtt
gtgataactgttctcgtaattgcagaatctgctgatacctgcataaaaacgatgttgcgc
aactgcaaagttgctcgtgcacttcctcgaatagctgattgtgcaaagaatgatcggaat
gcagtccttcgtgcaagatgctgtgagtatgcacttctaatcctggaacattggcctgat
gcttctgagatacaacgttcagcagaactctatgaagaccttataaagtgttgtgtagca
gatgcaatgggtgaggtacgatcaattgcaagatctttgtacagaatgtttgcaagaact
tggccagaacgttccaggcgtttgtttatgtcctttgatcctgttatccaaaggatcata
aatgaggaagatggtgggactcacagacgacatgcttcaccttctgttcgagagaggagt
tcacacttctcacttgcgcctcaaacatctgcttcgcagattcctggttatggaacatct
gcaatagttgctatggatagaacttccagtttgccttcaggcacgtccctctcctctggg
ctactcctatcacaaacaaaacctgtgggtactggcacagaacgtagcttggaaagtgta
cttcatgccagcaaacagaaagtttctgctatagaaagcttgctcaaaggtctggatata
tctgagagaagtcgatcctctagtttggatctaggagttgacccaccatcgtcccgtgat
ccaccatttcctcttgctgttcctgcgtcgaatagtcttgctaatgctttggtagatgca
ccatctggtttctttaaaggtaataatcgcaatggtggattgggtttgtccgatatcatt
actcagatccaggcctcgaaggattctgctaaagcatcctatcgaagtagtgtggttcat
gaatccttttcagctaattcttattcggcaagaagggcttctgaaaaactacaagataga
ggatttgttgaagatcatgctgaacagagggaaggtaggcggctaatgaactcgcatgtt
cacagacaatatgtagagtcaccatacaaagatgctaactttagggattatcagaataat
tacgttccaaactttcaacgtcctctatcaagaaagaacacagcaggaagaatgtctgct
agcaagaggaggagctttgatgacagtcagctcccactaggagaaatgtcaagttatgtg
gatggacccgcttcactaagtgatgcattaagtgagggtctcagtcctagttcagattgg
aatgctagggttgctgcatttagctatatcaggtctttgctacagcaggggcctagaggt
attccagaaatcattcagagcttcgagaaggttatgaaattatttttccagcaccttgat
gatccccatcataaagttgcacaggcagctctgtcaacccttgcagatcttattccagct
tgcagaaaaccatttgagagttacatggagaggattttgccccatgttttctcgcggcta
attgatcccaaggaatcggtgaggcagccttgctccactacattagaaattgtaagcaaa
acatatggtatagattcccttttgccagctttgctccgttcattggatgaacagcgttct
ccgaaggccaagcttgctgtaattgagttttcaattggctcttttaacaagcatccttcg
aattctgaaggtgctggaaatagtggcatcctcaagttatggcttgctaagttgacacca
ctagtctatgataaaaacaccaaactgaaagaagcagctatttcatgcattatatcagtg
tacacacactttgatgcaacaggggttttgaattttattcttagcttatcagttgaagaa
caaaattccttgagacgggcacttaaacagtatacccctcgtatagaggtggatttgatg
aattttctacagaataagaaggaaaggcaacgttccaagtatgatctatctgatgttgtt
ggaacatcttctgaagagggatatataggagcttcaaagaaaagtcatctatttggaagg
tattctggaggttcagttgataatgatggtgccagaaagtggaactctgttccagactcg
acctatatgactagctccataggtcactcgttgtctgatgatactcaagacttctatcgt
gatgttgaaactggttccaactccgatcttcctgtttcaaaagctttggcccttaccgct
aatcagagtgacggattgtgggataatccgcaggaatataattacgacagcttaaagatg
gagcacacttccactccccatctggaggttaatgggttagttgactcggagcatctaggg
gtagctgtgggtgttggagctgataaggaatctgattcgggacttaatcacctgaaactt
tctgctctgaagataaactcaactccagcaactggaccaagcattccgcaaattcttcat
acgatctgtaatggcagtgatgaaagttgtgctgccaacaagcatggtgcactcgaacaa
ctagttgaagctgttgccaatgatcaatctatatggaataagtacttcaatcggatattg
actgctgtactcgaggtgctagatgattctgagtcttcaataagagaacttgctctatct
ctgatagtcgaaatgctgaagaatcagagagatgctatggaggattcagttgaggttgta
attgaaaaactgctcaacgcaaccaaggatgttgccccgaaagttgcaaatgaagccgag
cattgtttaactatggtattgtccttgtatgacccatttagatgcttaagtgttgttgtt
cctttgcttgtcaccgaagatgagaagactcttgtaacttgtattaactgtttgacaaag
cttgtggggaggctttcccaggaagaattgatgtctcagctaccctcgttcttacctgcc
ctgtttgatgcttttggaaaccagagtgcagatgttcgcaagactgttgtgttctgtttg
gttgacatatacatcatgctcggcaaagcatttttgccatacttggaagggctgaacagc
acacagttaagattggtgactatttatgcaaatcgaatatcacaggccagaacaggtact
cctatagatgctaaccgcagttag
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