Nicotiana attenuata (coyote tobacco): 109226197
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Entry
109226197 CDS
T05870
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109226197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nau03032
]
109226197
03400 DNA repair and recombination proteins [BR:
nau03400
]
109226197
DNA replication proteins [BR:
nau03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
109226197
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
109226197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
109226197
NCBI-ProteinID:
XP_019246538
LinkDB
All DBs
Position
1:complement(49271394..49284574)
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AA seq
990 aa
AA seq
DB search
MMTTKVFNGASVFMSRNLVPPEEFDALHDALKHNGALVFLCCDPSRNSCTDYHVISSPHH
EKFGDLQAKGCNLIGPQCVLSCAKEQRPLPQQGFTCCLAMDGVKILASGFEMDEKVELGK
LVSAMGGVLHTKASLDVSFVIVKNVLAAKYKWAVNKLKKPIVTIDWLQQCWKEHRLVPQE
SFKVLPFSGLTICVTRIPIDERKEMEKIILQNGGKYSPELTRKCSHLICNAPEGEKYKVA
KRWGHIHTVTKRWFDQSVARRACLDEESYPVQAGSPNTMTTLRMTNQHSLKKGMRNLQGL
SSLATPSNAEPVLCSGASDSYVEATLSQDMSDAPVLTKEEENLAPAENPKSDYSAPVSTK
NEQSGAPIEQEKNDCDGGVADDSQTDDNDFYLADCRILIVGFNASEMRKLVNLVRKGGGS
RYMSFGEKLTHIIAGNPSENEIKELRNLAALGVVHVVKSGWLQDCDREKKEVPVLRKHIA
YDLLLPKDPIHCSNGAGTSTSMKRQGKSYVHTISSDEHAWRGTDSGCTMPSDKNKELENM
NDIRTSLRENGVQHQPYSSNHKDEKLLNESGCAVNGRKPSSVFEGRRFCFSASFPVDRRA
EIVEWVSQGGGVVVEDQTETNVHFTVECHGTLRSEKDGAAATFVSSHWIKSCLEDGCLLD
VGSHILYSPLPCRVPFPAFQSFHFCVSQYDEKERQLLRNLCFTIGAKFAEKLTKRVTHLL
CKFISGPKYEVACKWGIQPVTCEWIYECIKLNKIVSPDPFYPKEVTSEDREAGVCTTSQF
PTQAVRMISGDTSSQPQSQPQELINLRTEAFAGRSIAKEEMKHSSRWNKKARLLVVEETN
CSLTCVSNENNAFCGTNPPEKNMIGSTKEGSSAVPDVAAAIEDLLEQTSKIHDQKSPSRI
ECDKELFTSGCNTLAQGHGDHHTTLGLSNDWTTRFEKKDDSHGHSGDATANVYDHFSETQ
TDSQVVGYAEDLSGRQMIIDRVRTRSSGLT
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacgaaggtgttcaatggagcgagtgtgttcatgtcgcggaacctcgtcccg
ccggaggaattcgacgcgcttcacgacgcgctcaagcacaacggagctctagtctttctc
tgttgcgacccctcccgaaattcttgcactgattaccacgtcatttcttctccgcatcat
gagaagtttggggatcttcaagctaagggctgcaacttgataggtcctcagtgcgtgctt
tcttgtgccaaagaacagaggccactaccccagcaggggtttacttgttgccttgcaatg
gatggggtcaagatcctggcatctggttttgagatggatgaaaaggttgaacttggaaag
ttggtgagtgctatgggaggggtcctgcatactaaagcctcattggatgtgagctttgtt
attgtgaagaatgttttggctgcaaagtacaagtgggctgtaaacaaactaaagaaacca
attgtcactattgattggcttcagcaatgctggaaagaacaccgtcttgttcctcaggag
tcattcaaagtccttcctttttctgggttgacaatttgtgtcaccagaattcctatagat
gagcggaaggagatggaaaagattatcttgcaaaatggcggaaaatactctcctgagctg
accagaaagtgctcacatttaatttgcaatgctccagaaggtgagaaatacaaggttgcc
aaaagatggggtcacatacatactgttactaagaggtggtttgaccaatctgttgcaaga
agagcatgtcttgatgaggaatcatatcctgttcaggctggttctccaaatactatgacc
accttaagaatgacaaatcaacatagcctgaaaaagggcatgagaaacctacaagggttg
tcctccttggctacgccatcaaatgcagaacctgttttgtgcagtggagcgtctgattca
tatgtggaagctaccctctcacaagatatgtctgatgctcctgtgcttacaaaggaggag
gagaatttagcacctgctgagaacccaaaaagtgattacagtgctcctgtctctacaaag
aatgagcagagtggagcacctatagagcaggaaaagaatgactgtgatggtggtgttgct
gatgactctcaaacagacgacaatgatttttatttggcagattgcagaatactaatcgtt
ggttttaatgcatctgaaatgcgaaaacttgtcaaccttgtccgaaaaggtggtggctct
cgttacatgtcttttggtgaaaagttgacacacataatagctggaaatccatcagagaat
gaaatcaaagaattaagaaatcttgcggctttgggtgtcgttcatgtggtaaaatcagga
tggctgcaggattgtgatcgtgagaagaaagaagttcctgttctaaggaagcatattgct
tatgatttacttcttccgaaagatcctattcactgtagtaacggagctggaaccagcacg
agtatgaaaagacaaggaaaatcctatgtgcatactatatcttcagatgaacatgcatgg
agaggcacagattctggatgtacaatgccatcagacaaaaacaaagaactagaaaatatg
aatgacattagaacttctttgagagagaatggggttcaacatcagccatattcttctaat
cacaaagatgagaagctactgaatgaatctggttgtgctgttaatggtagaaagccatct
agtgtgttcgagggaaggcggttttgcttttcagcttcatttcccgttgatcggagagct
gaaattgttgagtgggttagtcaagggggaggagtggtggtggaagatcaaactgaaaca
aatgtgcatttcactgtcgagtgtcatggtacgttgcgctccgagaaagatggtgctgcg
gctacttttgtatcaagtcactggattaagtcttgtctggaggatggatgcttgctggat
gttggtagtcacatcctctattctccacttccatgccgagttcctttccctgcattccag
agttttcacttctgtgtttcacagtatgatgagaaagaaagacagttgctgagaaatttg
tgttttacaattggagccaaatttgctgagaaattgactaaaagggtcacgcatttgttg
tgtaaatttatcagtggccctaaatatgaggttgcatgtaagtggggaatacaaccagtc
acttgtgagtggatttatgagtgtatcaagctgaacaaaattgtttctccagatccattt
tatcctaaggaagtcacttctgaagatcgagaagctggggtatgcacaacgagccagttt
cccacacaagctgttaggatgatatctggtgatacctcttcccagcctcaaagccagccc
caagaactcataaatctgagaactgaagcttttgctggtagaagtattgcaaaggaagaa
atgaagcattcaagtagatggaataagaaggcaaggctcttggtagttgaagaaaccaat
tgttcattgacctgcgtatcaaatgaaaataatgcattctgcgggacaaatcccccagaa
aagaacatgataggaagtactaaagaaggttcttctgcagttcctgatgtagctgctgct
atagaggatttattggagcaaacaagcaagatccacgatcaaaagtctccatcaagaatc
gagtgtgataaagaactttttacatctggttgtaacactcttgctcaaggtcatggagat
catcatactactcttggattgtctaacgactggacgaccaggtttgagaaaaaagatgat
tcccacggtcattccggagatgcaactgcaaatgtgtatgatcactttagtgaaacacag
acagactctcaggttgttggatatgcagaagatttgtctggcagacaaatgattatcgat
agagtacgaacaaggagttctggcttgacttga
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