Nicotiana attenuata (coyote tobacco): 109226327
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Entry
109226327 CDS
T05870
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109226327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109226327
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109226327
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
FANCI_S4
Motif
Other DBs
NCBI-GeneID:
109226327
NCBI-ProteinID:
XP_019246660
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All DBs
Position
5:complement(25623910..25632566)
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AA seq
318 aa
AA seq
DB search
MDNLPKPPPFVDQLRRSALLVAQKPPELATASPEQLIALLHDSNLREAVLSQLNVVIKQK
REMCSNLALLLWNSFNTVYILLQEVLAVYPKLSTSTLTMKESTRVCDALTLLQCMASHPE
TRKGLVKANIPFYLYPFLRASANEKPLEFVRLSSLGLIGSLAKFDDPYGPEILNFFLETQ
LFPLCLRCMDQGDELSRKVATLIVMKILMQEEGLDYCCAFTERFLAVVQALSRLVEKLSV
NPCFQLLKYVVQCYLCLSQVSRVCDVLRYNFPPQLIDNTFHIILRVSRQLLSSTLEDPDT
LNMLHQIFFNITSRGSRP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggataatttgccaaagccgccgccatttgtggaccaactccgccgtagcgcattgttg
gtcgcacagaaacctcctgaattggcaacggcctcgccggagcagttgatagcgttgctt
cacgacagtaatcttcgtgaagcggttcttagtcaactcaacgttgtcatcaaacagaaa
cgagaaatgtgcagcaatctggctttgctgttgtggaactcctttaatacagtctacata
cttttacaggaagtattagcagtgtacccgaagttgtcaacctcaacattaaccatgaag
gaatctactcgagtttgtgatgctcttactttacttcagtgtatggcctctcacccagaa
acaaggaaggggctcgtcaaagccaatataccattttatctttacccatttctcagagct
tcagcgaatgagaagcctttggaatttgtaaggcttagcagcttgggtcttattggttcc
ctagcaaagtttgatgatccatatggaccagaaattcttaatttttttctagaaacacaa
ctatttcctttgtgcttgcgctgcatggatcagggagatgaactgtcacggaaggttgca
acgctcatagttatgaaaatcttgatgcaagaggaagggctggactattgttgtgctttt
actgaacgttttctggcagtggtacaagccttgagtcgactggttgaaaaactttctgta
aacccttgtttccagctgctaaaatatgttgttcaatgttatctatgtctttcgcaagta
tcaagggtatgtgatgtattgagatacaattttcctccgcagctaattgacaacactttt
cacatcattcttcgtgtgagtcgtcagcttctttcctccacactggaagatccagatact
ctaaatatgctacatcaaatatttttcaacataacttcgcggggatctagaccgtaa
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