Nicotiana attenuata (coyote tobacco): 109226385
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Entry
109226385 CDS
T05870
Name
(RefSeq) transcription elongation factor SPT4 homolog 2-like
KO
K15171
transcription elongation factor SPT4
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109226385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109226385
03019 Messenger RNA biogenesis [BR:
nau03019
]
109226385
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109226385
RNA polymerase I system
109226385
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
109226385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
HIPIP
Motif
Other DBs
NCBI-GeneID:
109226385
NCBI-ProteinID:
XP_019246709
LinkDB
All DBs
Position
5:46838532..46839562
Genome browser
AA seq
117 aa
AA seq
DB search
MGSQQAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDYERVGDCTTSNF
TGLISVMDPTRSWAARWLRIARSVPGCYTLAVSEALPEDLKNLCQDERIPYNPPKRI
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgggaagccaacaagcagcacaaattccgaccagttttgggcatgaactgagggcttgt
ctccgttgccgccttgtcaaaacctacgaccagtttagggaatcaggatgtgagaactgt
ccctttttcaagatggatgaagattatgaacgtgtaggggactgcactacttctaatttt
actggtttgatctccgtcatggatccaactaggagctgggcagcccggtggcttcgaatt
gcacgatctgtccctggttgttacacgcttgctgtgtctgaggcacttccggaagatttg
aagaatctatgtcaagatgaacgtatcccatataatcctccaaaacgcatctga
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