Nicotiana attenuata (coyote tobacco): 109226586
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Entry
109226586 CDS
T05870
Name
(RefSeq) oligouridylate-binding protein 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109226586
03041 Spliceosome [BR:
nau03041
]
109226586
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109226586
Spliceosome [BR:
nau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109226586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
109226586
NCBI-ProteinID:
XP_019246934
LinkDB
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Position
6:complement(8307499..8315649)
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AA seq
405 aa
AA seq
DB search
MQQQRLKQQQQQALMQQSLYHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVT
EPLLQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWA
YASAQREDTSNHYNIFVGDLSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRGFGFVS
FRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGAVGEQNSDAKSVVELTSGTSDDGQEK
VVNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHALGAGVIEDVRIQRDKGFGFVRYNS
HAEAARAIQLGNARLLFGKPVKCSWGSKPTPPGSSSNPLPPPAIGQIPGLSAMDLAAYQR
QLALAKMAGAQAFMQPQGQRIGAPGQGIYDGGYGGIASTQPPMYF
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcaaaggctgaaacaacagcaacaacaagcattgatgcaacaatcactttat
caccctggtctcttagcaccccctcagatagaacccatcttgagtggaaatctgcctcct
ggatttgattcgagtacttgcaggagtgtgtacgtgggaaacatccacccacaagttaca
gaaccacttcttcaggaggttttcgcaagcactggtccccttgagggatgcaagctcata
agaaaggacaagtcatcctatggttttgtggattactttgatcgccgatcagctgccctt
gcgattgtgacccttaatggaaggcacttgtttggacagcctataaaagttaactgggca
tatgccagtgctcaaagagaggacacatcaaatcactataacatttttgtgggtgatctt
agtccggaggttacagatgccacattgtttgcatgcttttcagtctacactagctgctct
gatgcaagagtgatgtgggatcagaaaacaggccgatcaagggggtttggatttgtctcc
ttccgtaatcagcaggaggcccagagtgcaataaatgacttgaatgggaagtggcttggt
agcagacaaatccgctgcaactgggcagcaaaaggtgctggagccgttggcgagcagaat
tcagatgccaaaagtgttgttgaattgactagtggaacatcagatgatggtcaagaaaag
gtggtcaacgaagatgctccagaaaataatccccagtatacaactgtttacgttggcaac
cttgctcctgaagttacttcagttgacctccatcgtcattttcatgctcttggggctggt
gttattgaagatgttcgtattcaacgagacaaaggttttggttttgtaagatacaacagc
catgctgaagcagctcgagctattcagttggggaatgccagactcctttttggtaaacct
gttaagtgctcgtggggaagcaagccaactccaccaggaagcagttccaaccctctacca
cctccggctataggacaaatccccggtctttcagcaatggatcttgcagcgtaccagagg
cagcttgctttagctaagatggctggtgctcaggcttttatgcaaccccagggtcagcga
atcggcgctcctggtcagggtatttatgatggtggttatggaggcattgcttcaactcaa
ccaccaatgtacttctag
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