Nicotiana attenuata (coyote tobacco): 109226587
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Entry
109226587 CDS
T05870
Name
(RefSeq) long chain base biosynthesis protein 1-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00600
Sphingolipid metabolism
nau01100
Metabolic pathways
nau04382
Cornified envelope formation
Module
nau_M00094
Ceramide biosynthesis
nau_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
109226587
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109226587
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nau01007
]
109226587
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
109226587
Amino acid related enzymes [BR:
nau01007
]
Aminotransferase (transaminase)
Class II
109226587
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
109226587
NCBI-ProteinID:
XP_019246935
UniProt:
A0A1J6I9I9
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Position
6:complement(8333105..8341553)
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AA seq
486 aa
AA seq
DB search
MDSAVSVLANVVRAASDWVTSVFEVPFARAVIFEVNIGGHLFVEGLLLVVIVFLMSQKSY
KPPKRPLTKKEIDELCEEWAPEPLIPSIADEMKHEPPVLESAAGPHTIVNGKDVVNFTSA
NYLGLLGSKELLETCTTALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSY
GLSTMFSAIPAFCKKGDVVIADEGVHWGIQNGLQLSRSTIIYFKHNNMESLRYTLEKVTQ
ENKQAKKLRRYIVVEAVYQNSGKVAPLDEIIKLKEKYRFRVLLDESNSIGVLGSSGRGLT
EHCKVPVDKIDIITAAMGHALATEGGFCTGNARVIDHQRLSSSGYVFSASLPPYLASAAI
KAIDIVEEKPELLVKLRQNIATLTKGLSDIKGLDLVSDPLSPIIFLTLKKSTGSSKGDLQ
VLEDIADHVLKEDSVFIATSKRSTLDKCKLPVGIRLFVSAAHTESDLVKASEALKRAAAS
LLPVHD
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggattcagcagtgtcagtacttgcaaatgtggtgagagctgcatctgattgggtgaca
tctgtctttgaggttccattcgcaagagctgtgatatttgaggtcaacattggaggacat
ctatttgtggaaggtcttctcctggtggttatcgtcttcctaatgtctcaaaagagttac
aaaccacctaaaagaccattgacaaagaaggaaattgatgagttgtgtgaagaatgggcc
ccagaaccacttatcccttccatcgctgatgagatgaaacatgaacctccggttctggaa
agtgctgcagggcctcatactatagttaatgggaaagatgtagtgaacttcacttcggca
aattaccttggattattaggaagcaaagaattactcgagacttgtactacagctctggaa
aagtatggtgtaggttcttgtggtccccggggattctatggcacaattgatgtccacctc
gattgtgaggctagaatagcaaaatttctgggaactccagattccatactctactcttat
ggactttctacgatgttcagtgcaattccagcattttgcaaaaagggagatgttgttatt
gcggatgaaggtgtccactggggaatccaaaatggccttcagctctctagaagtaccatc
atatattttaagcataacaatatggagtccttacgatatactttggagaaagtaacccaa
gaaaacaaacaagctaagaagctgcggcgctatattgttgttgaagctgtgtatcagaat
tctggcaaagtagctccattagatgaaatcatcaagctgaaggaaaaatatcgattccgt
gtgttgctggatgagagcaattccattggtgtgcttggcagttctggtagaggtctaact
gaacactgtaaagttccggttgacaagatagatataataactgcggcaatgggacatgca
ttggccacagaaggtggcttttgcactgggaatgctagagtcattgatcaccagcgcctc
agtagttctggttatgtcttctctgcttcactgcctccttacttagcaagtgctgcgatt
aaggctattgatatcgtggaagaaaaacctgaacttcttgtcaaactgaggcaaaatatt
gctaccctgactaaaggtttatcagatataaaaggcttagacttagtcagtgatccgctc
tcccctattatattccttacattaaagaagtccactggttcttcaaagggtgatctacaa
gtgcttgaagatatagcggatcatgtgttgaaggaagattctgtctttattgcgacttca
aagagatcaactcttgataaatgtaagctgccagttggaattagattatttgtctcggca
gctcatacagaatccgatttggtgaaagccagtgaagcattgaaaagagcagcagcatca
ctattgccagttcatgattga
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