KEGG   Nicotiana attenuata (coyote tobacco): 109226821
Entry
109226821         CDS       T05870                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau00040  Pentose and glucuronate interconversions
nau01100  Metabolic pathways
Module
nau_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:nau00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    109226821
Enzymes [BR:nau01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     109226821
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim NosD Pectate_lyase_4
Other DBs
NCBI-GeneID: 109226821
NCBI-ProteinID: XP_019247232
UniProt: A0A1J6IT78
LinkDB
Position
6:complement(34552063..34555840)
AA seq 392 aa
MDNLIISCTTILFLSSIFLFLQSNATSTYNVLSFGAKPNGQTDATQPFLKAWSAACSSVQ
PATIYVPRGRYLIKAGTFRGPCKNRITLRIDGTLVAPLDYWAIGNSGYWLLFIQVNGISV
IGGNLDAKGAAFWACRKSGNNCPVGARSITFNWANDIVISGLLSINSQLTHIVINSCNNV
IVRNVSIIAPDQSPNTDGIHVQSSTGVTIINSRIKTGDDCISIGPGTRNLWMENILCGPG
HGVSIGSLARNYEEDGVQNVTLVYSIFTGSDNGLRIKSWARSSTGFVTNINYRNIVMKYV
DNPIIIDQNYCPNNQDCPGETSGVKISQVTYENIQGTSTTPVAMKFDCSPSNPCKGIQIK
DIKLTYMNKKAQSFCKNVQGSKRGVILPDSCI
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggataacctgataatatcttgcactactatcctcttcttatcttctatatttctattc
ttgcaatcaaatgcaacatcaacctacaatgtgttaagctttggtgcaaaaccaaatggc
caaactgatgcaactcagccatttctgaaggcatggagcgctgcatgcagctcagtgcaa
ccagcgaccatttacgttccccgaggacgttatcttataaaggcaggaacatttagaggg
ccatgtaaaaatagaataactctaaggattgatggaacccttgtggctccattggattat
tgggccattggcaactccggctactggcttttgttcattcaggtcaatgggatttccgtc
atcggtggaaatcttgatgctaaaggagcagctttttgggcttgccggaaatcgggcaat
aattgcccagttggagctaggtcaataaccttcaattgggctaatgatattgtgataagt
ggcttactatcaatcaacagccagctaacacatattgtgatcaatagctgcaacaacgtg
attgttcgaaatgtaagcataatagcccccgatcagagcccaaacaccgatggcattcat
gttcaatcatcaactggtgttactatcataaatagtagaatcaaaactggagatgactgt
atatctattggacctggcactagaaatctttggatggagaacattctatgtggacctgga
catggtgttagcattggaagtctagcaaggaattatgaagaagatggcgtgcagaatgtg
acattggtttactcgatattcacaggatctgataatgggttaagaataaaatcttgggca
agatccagcactggttttgtcaccaacattaattaccgcaacatagtcatgaagtacgtt
gacaatccaatcatcattgatcagaattactgcccaaacaaccaagattgtccaggcgag
acttctggtgtaaagattagtcaagtaacgtatgaaaatatacaagggacgtcaacaact
ccagtagctatgaaatttgactgcagtcccagcaatccatgcaaaggaatccagataaaa
gacataaagcttacttatatgaacaaaaaggcacaatctttttgcaagaatgttcaagga
agtaaaagaggagtcattttgcctgacagttgtatatga

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