Nicotiana attenuata (coyote tobacco): 109226821
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Entry
109226821 CDS
T05870
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109226821
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109226821
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
109226821
NCBI-ProteinID:
XP_019247232
UniProt:
A0A1J6IT78
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Position
6:complement(34552063..34555840)
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AA seq
392 aa
AA seq
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MDNLIISCTTILFLSSIFLFLQSNATSTYNVLSFGAKPNGQTDATQPFLKAWSAACSSVQ
PATIYVPRGRYLIKAGTFRGPCKNRITLRIDGTLVAPLDYWAIGNSGYWLLFIQVNGISV
IGGNLDAKGAAFWACRKSGNNCPVGARSITFNWANDIVISGLLSINSQLTHIVINSCNNV
IVRNVSIIAPDQSPNTDGIHVQSSTGVTIINSRIKTGDDCISIGPGTRNLWMENILCGPG
HGVSIGSLARNYEEDGVQNVTLVYSIFTGSDNGLRIKSWARSSTGFVTNINYRNIVMKYV
DNPIIIDQNYCPNNQDCPGETSGVKISQVTYENIQGTSTTPVAMKFDCSPSNPCKGIQIK
DIKLTYMNKKAQSFCKNVQGSKRGVILPDSCI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggataacctgataatatcttgcactactatcctcttcttatcttctatatttctattc
ttgcaatcaaatgcaacatcaacctacaatgtgttaagctttggtgcaaaaccaaatggc
caaactgatgcaactcagccatttctgaaggcatggagcgctgcatgcagctcagtgcaa
ccagcgaccatttacgttccccgaggacgttatcttataaaggcaggaacatttagaggg
ccatgtaaaaatagaataactctaaggattgatggaacccttgtggctccattggattat
tgggccattggcaactccggctactggcttttgttcattcaggtcaatgggatttccgtc
atcggtggaaatcttgatgctaaaggagcagctttttgggcttgccggaaatcgggcaat
aattgcccagttggagctaggtcaataaccttcaattgggctaatgatattgtgataagt
ggcttactatcaatcaacagccagctaacacatattgtgatcaatagctgcaacaacgtg
attgttcgaaatgtaagcataatagcccccgatcagagcccaaacaccgatggcattcat
gttcaatcatcaactggtgttactatcataaatagtagaatcaaaactggagatgactgt
atatctattggacctggcactagaaatctttggatggagaacattctatgtggacctgga
catggtgttagcattggaagtctagcaaggaattatgaagaagatggcgtgcagaatgtg
acattggtttactcgatattcacaggatctgataatgggttaagaataaaatcttgggca
agatccagcactggttttgtcaccaacattaattaccgcaacatagtcatgaagtacgtt
gacaatccaatcatcattgatcagaattactgcccaaacaaccaagattgtccaggcgag
acttctggtgtaaagattagtcaagtaacgtatgaaaatatacaagggacgtcaacaact
ccagtagctatgaaatttgactgcagtcccagcaatccatgcaaaggaatccagataaaa
gacataaagcttacttatatgaacaaaaaggcacaatctttttgcaagaatgttcaagga
agtaaaagaggagtcattttgcctgacagttgtatatga
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