Nicotiana attenuata (coyote tobacco): 109226822
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Entry
109226822 CDS
T05870
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109226822
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109226822
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109226822
NCBI-ProteinID:
XP_019247233
UniProt:
A0A1J6IC66
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Position
6:34615822..34618988
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AA seq
392 aa
AA seq
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MANFKTMTCTGVSLLLFFCLIPSCLAYNVVSFGARGDGRTDSTSAFLRAWSAACHSTSQA
NVYIPRGTYLVRTLNLNGPCRRRIEFRIDGTLIAPANYHAIGHSEFWIMFYKVSGLSVYG
GTMNAKGHGYWSCRKGGKSCPQGARSIQFMWCNNVLLRGLTSLHSQRVHVGINYSSNVRV
ENVKIIAPSGSPNTDGIHVQNSRGVTIYGSIIQTGDDCISVGPGSMNLWIEKIGCGPGHG
ISIGSLGSSYKEAGVTNITVTNSVFTKTQNGVRVKSWARPSGGYAKNLMFSNLIMKNVGY
PIIIDQNYCPDNNCPHQNSGVKVSQVTYKNVKGTSSTQAAMKFDCSYTNPCTGIRLQDIK
LTHNDRLRRPAISYCRNASGRRGGTVIPRSCF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttcaaaaccatgacatgtaccggtgtttctttgttgctcttcttttgttta
ataccttcttgtttagcctacaatgtggttagttttggggctaggggagatgggaggaca
gactcaacttccgcatttcttcgcgcttggtctgctgcctgccactctactagccaggcg
aacgtgtacattccacgaggaacatatttggtaagaacgttgaatttaaacggcccttgc
cggagaagaattgagttccgaattgacggtactctcattgctccagccaattatcacgca
attggtcattctgagttctggattatgttttataaggtaagtgggctttcagtgtatgga
ggaactatgaacgccaagggtcatggttattggtcgtgccgaaagggtggaaagtcttgc
ccacaaggagctaggtcaattcaatttatgtggtgtaacaatgtactgttgaggggctta
acatcactccacagtcaaagagtacatgtagggattaattacagcagcaatgtgagagtt
gagaatgtgaagataatagcaccaagtggaagcccaaatactgatggcattcatgtacaa
aactcaagaggggttaccatttacggcagcatcatccagactggagatgactgcatttct
gttggtcctggttccatgaacttgtggattgaaaaaattggatgtggacctggacatggc
atcagcataggaagtttggggagtagttacaaggaagctggagttacgaatataacagta
acaaattcggttttcacgaagacacagaatggcgttagagtaaagtcctgggcaagacca
agtggtggctatgctaaaaatctcatgttctcaaatcttattatgaagaatgttgggtac
cccataatcattgaccaaaactattgtcccgataataattgccctcatcagaattcagga
gtaaaggtgagtcaagtaacatacaagaatgtgaaagggacatcatccacacaggcagcc
atgaaatttgattgcagttacacaaatccatgcactggaatcagactgcaagacataaag
cttactcacaatgatcgcttaagaaggcctgcaatatcctactgtagaaatgcaagtgga
agacgtggtggcacagtcattcccaggagttgtttctaa
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