Nicotiana attenuata (coyote tobacco): 109226823
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Entry
109226823 CDS
T05870
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109226823
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109226823
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109226823
NCBI-ProteinID:
XP_019247234
UniProt:
A0A1J6IAF1
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Position
6:34653563..34656495
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AA seq
397 aa
AA seq
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MRKMSLLENLPLFFIVFFLILNSSIAATAIYNVKNYGAKSNGKIDSSKAFLSAWAAACAS
SSPATIYVPKGSYLLKSAYFLGETCKSNAITLHIDGTILAPSDYNVIRNEENWIKFERVT
GVSIYRGTLDGQGASLWACKNSSKNCPQGTMGLTFSNSSNIDISGLTSKNSQMFHILVDN
CHNVKLQGVKVSAPGNSPNTDGIHVQYSSKVTIMNSHIGTGDDCISIGPGTSNLWIENIA
CGPGHGISIGSLGWELEEPGVQNVTVKTVAFSGTQNGLRVKTWARSSNGFVRNVLFQHIV
MANVQNPIIIDQNYCPNNENCPHQGSGVKISNVKYQDIRGTSATEVAVKFDCSKKYPCSG
IALEDINLSYRDQPAETSCVNAGGRASGSVKQTSCLG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaatgagtttactagaaaacctcccactttttttcatagtcttcttcttgatc
ttgaactcttccattgctgcaactgcaatatataatgtcaaaaactatggagcaaaatca
aatggaaaaatcgattcatccaaagcttttctgagtgcatgggctgcagcatgtgcatct
tctagccctgccaccatttacgtgccaaagggaagttacttgcttaaaagtgcatatttt
ctaggtgaaacatgcaagagtaatgctattaccttacacattgatggcactatattagct
ccatcggattataatgttattcggaatgaagaaaattggatcaaatttgaaagagttact
ggagtttccatatatcgtggaaccttagatggacaaggtgctagtctttgggcttgcaaa
aactctagcaagaattgtcctcaaggaacaatgggacttactttttccaactccagcaac
atagatataagcggattaacatcgaaaaacagtcaaatgttccacatattggtagataat
tgtcataatgtgaagctacaaggagtaaaggtatcagctccaggaaacagtcccaacacc
gatggtattcacgtccaatattcgtctaaagtcaccattatgaactctcatattggaact
ggagatgattgtatctcaattggccctggaacctccaacttatggattgaaaacattgcc
tgtggccctggccatggaataagcattgggagtttaggctgggaactagaagagcctgga
gttcaaaatgttacagttaaaacagtcgcgttcagtggaacacaaaatggattgagagta
aaaacatgggcaagatcaagcaatggctttgtcagaaatgttctcttccagcatatagtt
atggctaacgttcaaaaccctatcatcatagaccaaaattattgccctaacaatgaaaat
tgccctcatcagggctcgggtgtgaaaatcagcaacgtaaagtatcaagacatacgcggt
acatctgctacggaagttgcagtgaaatttgattgtagcaaaaaatatccatgcagtggc
atagcactagaagatataaatcttagttatagagatcaaccagctgaaacttcttgtgtt
aatgctggaggaagagcttctggttctgtaaaacaaactagttgcttaggttag
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