Nicotiana attenuata (coyote tobacco): 109226829
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Entry
109226829 CDS
T05870
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109226829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109226829
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109226829
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
109226829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
DZR
Motif
Other DBs
NCBI-GeneID:
109226829
NCBI-ProteinID:
XP_019247248
UniProt:
A0A1J6IAF9
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Position
6:complement(35640421..35647307)
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AA seq
321 aa
AA seq
DB search
MEEMEMDSIECVSSSMDGIEDEEIQSSVSSHQQYSSAKPHPNVIPSGIAPTSVHELLECP
VCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY
SLGCPEIFPYYSKLKHETLCNFRPYNCPYAGSECSVTGDIPYLVTHLRDDHKVDMHTGCT
FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESEARS
YSYSLEVGGNGRKLLWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT
GRIWKEQQNPDGGVCIPNLCS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatggagatggatagcattgagtgtgtatcatcatcaatggatggcattgaa
gatgaagagatccaatcttctgtttcatctcatcaacaatactcttcagcaaaacctcat
cctaatgttataccttccgggattgcccctactagtgttcatgaattgctggaatgcccc
gtttgtactaattctatgtacccacctattcatcagtgtcacaatggacacacgctttgt
tcaacttgcaaaacaagggtgcacaatcgatgtcccacatgcagacaagagcttggtgat
ataagatgtttagcgctagagaaggtagcagagtcgcttgaactgccttgcaaatattat
tctttgggctgcccagaaatattcccatattacagcaaactcaaacatgagacattgtgc
aattttagaccgtacaattgcccatatgctgggtcagagtgctcagtgaccggagacatc
ccttatttggttacgcatttaagagatgaccacaaagtggatatgcacacaggatgcacg
ttcaaccatcgttatgtaaagtctaatcctcgtgaagtggaaaatgccacatggatgctg
acggtcttccactgtttcgggcagtatttctgtctccattttgaggcgttccagcttggc
atggcacctgtatatatggcatttctacgcttcatgggtgatgaaagtgaggcacgcagt
tacagctacagtttagaagtaggaggaaatggtagaaagctcttatgggagggtacccca
agaagtattcgagatagccaccgtaaggtcagagacagtcacgatggtcttataatccaa
cgtaacatggcacttttcttctctggtggtgaccggaaagagctgaagcttagagttact
ggacggatatggaaggaacaacaaaatccagatggtggggtgtgcataccaaatctctgt
agctaa
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