KEGG   Nicotiana attenuata (coyote tobacco): 109226876
Entry
109226876         CDS       T05870                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109226876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nau03041]
    109226876
Spliceosome [BR:nau03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109226876
 Complex B
    109226876
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 THRAP3_BCLAF1 zf-CCCH_4 Torus
Other DBs
NCBI-GeneID: 109226876
NCBI-ProteinID: XP_019247316
UniProt: A0A1J6IV02
LinkDB
Position
1:55292951..55298936
AA seq 320 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
GVDVHGQPIDPRKMQEHFEDFYEDLFEELNKYGEIESLNVCDNLADHMVGNVYVQFREEE
QASNALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNFMHLKRIGREL
RRQLFGRYRRRHSRSRSRSRSPYRHRSYEERSHRSHSRKYDDRDYYHESRSRRHTTSPGH
RRGRSRSPRGRRDRSPTRDSSEERRARIEQWNREKEEAELTNKTNAVGINYNDESNEHGY
AQNGNGYNDQQPSQQNGYGN
NT seq 963 nt   +upstreamnt  +downstreamnt
atggctgaacacttagcatcgattttcggtacagagaaagatagagtgaattgtccattt
tactttaaaattggtgcatgtagacatggagatcgttgttctagacttcatacaaagcct
agtattagcccgacgcttctcctttctaatatgtatcaaaggcccgatatgattactcct
ggtgttgatgttcatggtcagcccattgatcctcgcaaaatgcaggaacattttgaggat
ttttatgaagatttatttgaagaactgaacaagtacggagagattgagagcctgaatgtt
tgtgacaatctggcggaccacatggtgggcaatgtctatgttcagtttagagaagaagag
caggcttcaaatgctcttaagaatcttacagggagattttatgctgggaggcccatcatt
gttgatttctctcctgtaactgattttcgtgaagccacctgtagacagtacgaagagaac
agctgcaaccgtggtggatattgcaactttatgcatcttaagaggatcggcagggagcta
agacgccagttgtttgggcggtataggagaaggcacagccgaagccgaagcagaagtcga
agtccttacaggcatcgtagctatgaagagcgctctcacaggagtcatagtagaaagtat
gatgatagagattattatcatgaaagccggagtaggaggcatactacaagtcctggacat
aggaggggtaggagcaggagccctcgtggcaggagggatcgaagtcccactcgggatagt
agtgaagagaggcgcgcaagaatagagcagtggaacagggaaaaagaagaggcagaactt
actaacaagaccaatgcagttggtattaattacaacgacgaaagcaacgaacatggatat
gcacaaaatggtaatgggtataatgatcagcagccatcacaacagaatggttatggaaac
taa

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