Nicotiana attenuata (coyote tobacco): 109227065
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Entry
109227065 CDS
T05870
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03013
Nucleocytoplasmic transport
nau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109227065
03015 mRNA surveillance pathway
109227065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109227065
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109227065
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109227065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109227065
NCBI-ProteinID:
XP_019247611
UniProt:
A0A1J6IBA9
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All DBs
Position
6:59518237..59529610
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AA seq
508 aa
AA seq
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MADSSSTASSTAAFVADSSSTTSSTAASTTAKSRETRSWADEADEIDQTEQSENASAETE
IGSLQIDESKRVNNSTLDDPEDSRIEAVTSGDTLYKSAKRFEDLNLSPELLKGLYVEMKF
ERPSKIQEISLPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLRAPQALCICPTR
ELAIQNMEVLLKMGKFTGITSELAIPADAANYIPISKRPPVSAQVVIGTPGTINKWVTAR
KLGMSCMKILVFDEADHMLAESGFQDDSIRIMKAIVKASVGCQVLLFSATFGESVKAFVT
KIVRDLFVKDYNQMFVKKEELSLDSVKQYKVQCPDELSKVMVIKDKILELGQKVGQTIIF
VRTRNSASMLHTSLVDYGYEVTTIQGALKQEDRDKIIKEFKEGLTQVLISTDLLARGFDQ
SQVNLVVNYDLPVRHESPSEPDHEVYLHRIGRAGRFGRKGAIFNLLCDDRDNMLMSKIEN
HFNSQVTEIASWKSEEDFENALKKAGLL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagttctagtaccgccagtagcactgccgcgttcgtcgctgacagttctagt
accaccagcagcaccgccgcttctacgacggcaaagtcaagagaaactagaagctgggca
gacgaagccgacgagatagatcaaaccgagcagtctgaaaacgctagcgccgagactgaa
attggatctctacaaattgacgagtccaaaagagtcaacaactccactcttgatgatcca
gaagattccagaatagaagccgttacatctggcgacacgttgtacaaatcagcgaagaga
tttgaggatttgaacttgtctcctgagttattgaagggattatatgtagagatgaagttt
gagcgacctagcaaaattcaagagattagtttacccatgattcttacgccgccctacaag
aatcttattgctcaggctcataatggctctggtaaaactacttgctttgtgcttggaatg
ttgagtcgggtcgatccgaagcttcgtgcccctcaagctctctgtatttgtccaaccaga
gaattggctattcagaatatggaagtgctgttgaagatggggaagttcactggtataaca
tcagagttagctatcccagcagatgcagccaactacataccaatttcaaagcggccacct
gtgtcagcacaagtagtaattggcacacctggaactataaataagtgggtgacggcaagg
aaactgggcatgagttgcatgaagattcttgtatttgatgaagcggaccacatgttggca
gagagtggttttcaggatgattccataagaataatgaaggcaattgtcaaagccagcgtt
ggctgccaggtgcttctgttttctgcaacgtttggggaaagtgtcaaagcatttgtgaca
aaaattgttagagatcttttcgtgaaagattataaccaaatgtttgtgaagaaagaagaa
ctttcgctggattcagtgaagcagtataaagtgcagtgtccggatgaactttcaaaagtc
atggtgattaaagacaaaattcttgaactaggacagaaggtggggcaaacaattatattt
gttcgtacaagaaacagtgcgagtatgttgcatacatcattggtggactatggctatgaa
gtgacaacaattcaaggggctcttaagcaagaagatagagacaaaataatcaaagagttc
aaagaaggattgacacaagttcttatatcaactgatcttcttgctcgtggatttgatcaa
tcgcaggttaatttggtggttaattatgatctccctgtaagacatgagagtccatcagag
ccagatcatgaggtatacttgcatcggattggtagagcagggcgttttggccgcaaaggt
gccatattcaacttgctctgcgatgaccgagacaacatgctgatgtcaaagattgagaac
catttcaatagtcaagtgactgagatcgcctcatggaaaagtgaggaggattttgagaat
gctctgaagaaagctggcttgctctaa
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