Nicotiana attenuata (coyote tobacco): 109227112
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Entry
109227112 CDS
T05870
Name
(RefSeq) polygalacturonase-2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109227112
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109227112
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
ETRAMP
Motif
Other DBs
NCBI-GeneID:
109227112
NCBI-ProteinID:
XP_019247680
UniProt:
A0A1J6IBH0
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Position
6:complement(65027041..65033233)
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AA seq
467 aa
AA seq
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MAHLRNLFILFTIFMIIISLSSCSSNIKFYDEDILREAQDHNMNLEKEFGYDFQAYPSNY
FNTIDLENNNNIDDQISRFNRFKNLEKDEAVGVTTINVESFGAKGDGNTDDTNAFQKAWK
AICLSSTAVNFVVPQNKKYLLKQIEFSGPCKSFITMQISGTLLASDKTSDYSKDSRHWLQ
FDSVQNLVVEGGGVINGNGKIWWQNSCKINKKLPCKHAPTALTFYNCNNLKVRDLKIEDS
QQMHLSFERCSGVEVTKLVVSAPENSPNTDGIHITNTQNILISGCTIGTGDDCISIESGS
RNVQAKDITCGPGHGISIGSLGDGNSEAHVSNIYVYGAKLTGTTNGLRIKTWQGGSGSAS
TIKFENVEMNGVKNPIIIDQNYCDQDSPCKEQDSAVQVKNVIYQNIEGTSATNEAINFDC
SKNFPCQRIMLQNVNLVGENDETSKAVCNHVNFVNISAVSPKCPQMN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcccatctaaggaatctcttcatattattcaccatttttatgattattatatcactt
tcatcttgcagcagcaacattaaattctatgatgaagatatattaagagaagctcaagat
cataacatgaatcttgaaaaggaatttggttatgattttcaagcttatccttctaattat
ttcaataccattgatcttgaaaacaacaacaatattgatgatcaaattagtagatttaat
agattcaagaatttggagaaagatgaagcagttggagttacaacaataaatgtggagagt
tttggagctaaaggtgatggaaatacagatgatacaaatgcatttcaaaaagcatggaaa
gcaatttgtttgtcttcaactgcagtgaattttgttgtacctcaaaacaagaaatatctt
ctcaaacagatcgaattttctgggccatgcaaatctttcatcacaatgcagatttctgga
actctattagcatcagataagacttcagattacagcaaagatagcagacactggcttcaa
tttgatagtgttcaaaacttggttgttgaaggaggaggagttatcaacggcaatgggaaa
atttggtggcaaaattcttgcaaaattaataaaaaattgccgtgcaagcatgcacccacg
gccctaacattctacaactgcaacaatttgaaagtgagggaccttaagatagaagattca
caacaaatgcatctctcatttgagagatgctctggagttgaagttacaaaacttgttgtg
agtgctccagaaaatagccctaacactgatggcattcatataacaaacacccaaaatatc
ctaatttctggttgtaccattggcacaggtgatgattgcatctcaattgagagtggatcc
cgaaatgttcaagccaaagacattacttgtggaccaggtcatggaataagtattggaagc
ttgggagatggaaattcagaagctcatgtgtctaatatttacgtgtatggagctaaactt
actggaactaccaatggacttaggatcaagacttggcagggaggatctggaagtgcaagc
accataaagtttgaaaatgtggagatgaatggtgtcaaaaaccccattattatagaccaa
aactactgtgatcaagattctccatgcaaagaacaggattcagcagttcaagtaaagaat
gtgatttatcaaaacatcgaaggcacaagcgcgacgaatgaagctataaattttgactgc
agcaaaaactttccatgtcaaagaattatgttgcagaatgtaaacttggttggggaaaat
gatgaaacttcaaaagctgtttgcaaccatgtcaattttgtcaacatttcagctgtctct
ccaaaatgtcctcaaatgaattga
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