Nicotiana attenuata (coyote tobacco): 109227271
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Entry
109227271 CDS
T05870
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nau03041
]
109227271
Spliceosome [BR:
nau03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109227271
Other components
Complex C specific factors
109227271
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Mis12
Mt_ATP-synt_B
Spectrin
Motif
Other DBs
NCBI-GeneID:
109227271
NCBI-ProteinID:
XP_019247909
UniProt:
A0A1J6IDA5
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Position
6:77344699..77348254
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AA seq
879 aa
AA seq
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MDDHQEMERFGVENDFEDGQWIGGEFYYRKRKEKKHVQTKDDVLYGVFASDDSDSDYQGS
SKKRKKCLSTKADLTKPVNFVSTGTVMPDQEIDRNFKEEKMSEASKGLGSDQEIDRNFKE
EKMSEASKGLGSGASVGLGFGTSSSKNIAADEYTKTQAQVEIEEENFLPTAFGRKIKEGA
LRREKEREKEKSMLAKKSSESGRREPGGDVGGFEKHTKGIGMKLLEKMGYKGGGLGKNEQ
GILAPVEAKLRPKNMGMGFNDYKETSAPTLQESEGKPVARPAQPVEGHSKEKLWSKQAKK
LKKVYITAEELLAKKQELGLEVVQKVFDMRGPQVRVLANLENLNAEDKARENDVPMPELQ
HNIRLIVDLAELDIQKIDSDLRNERETVVALQKEKEKFQAEAARQKRQLDNMEEIVSVLD
RIGQESSSGTLTLDSLAAAFAELQQQYSEEYKLCNLSSIACSYAQPLFIRVFQGWDPLQT
PTHGMEVVSRWKYLLQGDDIFTISDAASPYTQIFMEVVFPAIRISGTNTWQARDPEPMLR
FLESWEKLLPRAVLQTILENIVLPKLSAAVDSWDPRRETIPIHSWVHPWLPLLGQRLESC
YHTIRNRLESVLHAWHPSDMSAYYILSPWKTVFDTINWEKLMVRFIVPKLLNVMHEFQIN
PANQNLDQFYWVRTWATAIPIHHMLPILDIFFNKWEVVLYHWLCSKNPNFEEVTKWYLGW
KELIPPELLANEHVRYRLNVGLDMMNQAVEGSEVAEPGLRENISYLRVLEQRQFETQKKA
AAQSQSRPSVGLNSGIQMDGTGGGDEMNLKRVIEVYAQQNDLLFQLKPGRMQDGHQIYGF
GKISIIIDSLNQKVFAQVEDRWSLVSLEQLLDLQKLKSR
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcatcaggaaatggaaaggtttggggtggagaacgattttgaagatggtcag
tggatcggtggtgagttctactaccggaagcgcaaagaaaagaagcatgttcaaaccaag
gatgatgtcctctatggtgtttttgcttccgacgatagtgactctgactaccagggatcc
tccaagaagcggaaaaaatgcctttccaccaaggctgacctcaccaaacctgtcaacttt
gtttcaactggaactgtcatgcccgaccaagaaatagatcgcaatttcaaagaggagaaa
atgtccgaagcgagcaaaggtttgggatccgaccaagaaatagatcgcaatttcaaagag
gagaaaatgtccgaagcgagcaaaggtttgggatctggagcatctgttggccttggattt
ggtactagttcctcgaagaatattgctgctgatgaatacaccaaaacacaggcccaggtt
gaaattgaagaggaaaactttctgcccactgcttttgggaggaagattaaagaaggtgcc
ctaagacgtgagaaggaaagggaaaaggagaagtctatgttggccaagaaatcttctgaa
tcagggagaagggaacctggtggcgatgttggtggctttgagaagcataccaaggggatt
gggatgaagttgcttgagaagatgggttataagggaggtggtttgggaaaaaatgagcag
ggaattttggctccggtcgaggcaaagcttaggcccaagaatatgggaatgggcttcaac
gactataaggagactagtgcaccaactcttcaagaatcagagggaaagcctgttgctcgt
cctgctcaacctgtggaaggccactcaaaagagaagctttggtcaaagcaagctaaaaaa
ctgaagaaggtttacattacagctgaagagttgttagccaaaaagcaggagctgggcctg
gaagttgttcagaaggtctttgatatgaggggtccacaggttcgagtcttggcgaatctg
gagaacttgaacgccgaagataaagcaagggaaaatgatgttccaatgcctgaacttcag
cataatattaggttgattgtggatttggcggaacttgacatacagaaaattgacagtgat
ttaagaaatgagagagaaacagttgttgctttgcagaaggagaaggagaagttccaagct
gaggcagctcgccagaaaaggcagcttgataatatggaagagattgtcagtgtattggac
cggattgggcaagagagctcatctggtactctgaccctagactcccttgcagcagcattt
gcagaattgcagcagcagtattctgaggaatataaactctgcaacttgtcaagcatagca
tgctcatatgctcagcctttatttatacgtgtttttcaaggatgggatccacttcaaact
ccaacacatggaatggaggtggtttccagatggaagtatcttttgcaaggggatgacatt
tttactatctctgatgctgcatctccttatactcaaatattcatggaagttgttttccct
gccattagaatatccggcaccaatacctggcaggcaagggaccctgaaccaatgcttcgg
tttttggagtcctgggagaagctgttgcctcgtgcagttcttcagacaatactggaaaac
attgtcttgcccaagttatcagctgctgtggactcctgggatccacgtcgagaaacaatt
ccaatccattcctgggttcatccatggctgcccttattgggtcaaaggttggaaagctgc
tatcacactatacgtaacagattggaaagtgtactgcatgcgtggcacccaagtgatatg
tctgcgtactacatattgtctccttggaagactgtgtttgatacaattaactgggaaaaa
ctgatggtcaggtttattgttccaaagttgttaaatgtaatgcatgaattccaaataaat
ccagcaaatcagaaccttgatcagttctattgggtccgtacttgggctactgctattccc
atccatcacatgcttccaatactggatatattcttcaacaagtgggaagtagttttgtac
cactggttatgctcaaaaaacccgaactttgaagaagtgacaaaatggtatttgggttgg
aaggaacttattccacctgaacttctggcaaatgaacacgttcgctatcgacttaatgtc
ggtctagacatgatgaaccaggctgttgaaggctcagaggtggctgaacctggtttgagg
gagaacataagttatcttagggttcttgaacaaaggcagtttgagactcagaaaaaagca
gcagcgcaatctcaatcccgtccttctgtgggcttgaacagtggaatccaaatggacggt
acaggtggcggggatgagatgaatttgaaaagagttattgaagtttatgcacaacagaat
gatttgttgtttcagcttaagcccgggcgaatgcaagatggtcatcagatatatggtttt
ggtaaaatcagcattattatagattctctcaatcagaaggtatttgcacaagtagaggac
aggtggtctttggtgtcacttgagcaactgttggacctgcaaaagttaaagagccgataa
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