Nicotiana attenuata (coyote tobacco): 109227584
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Entry
109227584 CDS
T05870
Name
(RefSeq) uncharacterized protein LOC109227584
KO
K24155
rabconnectin-3a
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109227584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109227584
Membrane trafficking [BR:
nau04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109227584
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
109227584
RAVE complex
109227584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_EML
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
109227584
NCBI-ProteinID:
XP_019248330
UniProt:
A0A1J6IV98
LinkDB
All DBs
Position
1:63403084..63424326
Genome browser
AA seq
2519 aa
AA seq
DB search
MESHNISCCNSVDDVVSQLPLQLIKSEIIPPTPNRSKSPSEFEPAIDWQPNFAGYSWIAY
GASSLLVIRQFPNPLSQTETVIGTVFQQVLELSIDGTGTVSAVAWSPVTPSSGDLAAALD
NCIGLFSYNSDASHSSFCWSQTSTLVQSTKVDSITWTGSGDGIVSGGIELILWRKKERSW
EIAWRFKPELPQTLISATWSIEGPLAAAPSHSEGSGSKIHAGHKCVLVCQRDADSGHSEA
MLPHPLPVSMIQWRPSLVTHSTRDGSYSRRLVLLTCCLDGAVRLWNEIDDGRVRKVGKDS
NDHKLSKFSFRVVAVVEVNQALNGMLGLDVSVRWATDISGLITVNEEAVTYSSSDEHQQS
NAGRCEWLIAIGPQTTLTFWAIHCLDDFSPVRAPRVTLWKRKELNSPNEVPRGLLLNKVL
IMRNQVFGPPAVCSFISLLPSNSLAWMQLYSSKFPKGEEVSSELSSTDESPPNKCQTECL
LSLCARGLSNADSHCSKILQVAIHPCLSELEFAASLDTDGKLLFWLFSSASNTIVGLPTL
SPSWKLFGKGAIALPQQPKYTSLRWAPTLLSEDHRILVTGHADGIDLLVVKAVKTEELEI
VCDKICTIPLTAGSHGQGPDSVFSIPLPSTCNKTILNSFLLFAVWEKGFQALSWKINLHH
YDLSETRCGCSFDSGNTLQNNIWKFESSYSGYRYLVSVEPSSSVLPEPHDNGKISSYAVI
CPTNSGLTEEIFANNLYSNYFAYHMVTGCLDGNLLLWRSVPAGSSNSQWDLVGRIALQQG
PILAISASVCGRKIATISKGHLSTSAIHIWECARIEDAGSFILEDTLYFDAEVVASNWLT
IGNGQFLLGVCSRGKVQVFTQKRCGGQCNLEPEKSFEGNIWVCLAASDTNPTIQDFFWGP
KAMIVVVHDEYISLFSKFSYFMNKKLLPQLGGKVCKQSSVCHYGSNKVPIFYGHENCDYA
QYQANFPLKMEVVNETSLFSSLTKSKEGFTSVKNGIWSILEIAELVGGSLPLVHPEAILV
NLLSGNWKRAYVALQCLSKHVASPKLSVEICCLRAFSGLIFPISLSNYLEGHVLLSTGEK
SFQWGGPSEVQKGFLQASSSWGYAASDNALSISSARSEITDFLEAFDKLHNFATISSTEM
MQIRAAIHLLDEVSNMQSTSAYNSLDGPGRRFWVSVRFQQLYFVQRFGRPPSEGELVVYS
GLIGWAFHSDCQENLFDSLISKEPSWREMRDMGVGLWYTSVAQLRVKMEKLARQQYLKNR
DPKACALLYIALNRLQVLAGLFKISKDEKDKPLVAFLSRNFQEDKNKAAALKNAYVLLGK
HQLELAIAFFLLGGDTTSAVTVCVKNLGDEQLALVICRLVEGYGGMLEHYLISKLLLPSA
LAKGDYWLASVLEWILGKPSHAFLRMLAFPTGSLNDKSIFSSRQPAFLDPSVGDFCLMLA
AKTTMKNSIGEQNAAALSRWAILMRATALSRCGLPLDALECLSSSVSIIGGSTGGSVPDN
VDSGYLHEMLSAMLNETSSNWLSSDVALRIESHMRSDLSMQYLSKMLRRHPSWVDHDMIC
LQGHMDTVSENEEYKLSVEAFQDELMTTIASFQLKFSLIPLHLMYLTFLSFCNGGLAYTG
CYLLRDYINKYLSTEQGHELDGCSLYAFLPKLFLEVSGELFYISARYIIMCSMDCFYLKS
FALRSNGADENIYGAILELYKKRLSWSLWCLRATMQFSSVSSAENFVGTHFTVLDLTEYL
LLFASALVQRNYSVLLLIVKPLLMARTSDETGIKDIQKLLCETRETVAHDLPIHDAGSSV
QNKNQMPQAQFGDVMLSVPEERWHVMVASFWGYVSSFLKYKLNLLSPEHEESGLFLPPGR
HPSVSTSLNCVNGNNVSIHIGIVPGLLAKILKITCTHISSYCVNRFASILLESIDPGATT
LFWSEDYLSLHKAPDTKLSHRNNDLDKLTAEDELSAFEALWDICSELKKANQGFVLQDQK
FLQHTLLKSFKGWNEMYPSIVRECEVEETCDRDDRFGSPSSAAGSPLACLSPNNHPFQSS
GGKDTNHTKKVLPFRSPMEIYKRNGELLEALCINSIDQHEAALASNRKGLLFFNWEDGLP
CANRSDNVWAEADWPHNGWAGSDSTPIPTCVSPGVGLGSKKGTHLGLGGATVGAGFLARP
TFGLPGYANTGGSNLGWGVQEDFDEFLDPPATVENVRTRAFSTHPSMPFFLVGSSNTHIY
LWEFGKDRATATYGVLPAANVPPPYVLASVSAVKFDHCGHRFVSAASDGTVCTWQLEVGG
RSNIRPTESSLCFNNYTSDVTYVTSSGSIIAAAGYSSSGVNVVIWDTLAPPATSRASIMC
HEGGARSLAVFDNDLGSGSISPLIVTGGKGGDVGLHDFRYIATGKVKRQKHTEIGDHGVN
SMVDMQKKTGDQNRNGMLWYIPKAHTGSVTKISTIPHTSFFLTGSKDGDVKLWDAKNAKL
VFHWPKLHERHTFLQPSSRGFGGVVQAAVTDIQIVPHGFLTCGGDGAVKLVMLNDLLRL
NT seq
7560 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcataatatcagttgttgtaactctgtagacgacgtcgtttcgcagttacca
cttcagctgatcaaatcggagatcatccctccgacaccgaaccgatcaaaatctccgtcc
gaattcgagccagcaattgactggcagcctaacttcgctggctactcatggattgcctac
ggtgcctcgtctctcctcgtcatacgtcaattccctaatcctctctcacaaactgagact
gtaatcggcacagtttttcagcaggtcctcgagctgtcaatcgacggcactggcactgtc
tccgccgttgcttggtccccggtgacgccttcttctggagaccttgccgccgcactcgat
aactgcattggattgttttcttacaattctgacgcttctcatagttctttttgttggagc
cagacctcaacactagtgcaatctacaaaggtggactcaatcacatggacgggatcagga
gatgggatagtttcaggtggcattgaattgatattatggagaaagaaggagaggtcgtgg
gaaatagcttggagatttaaaccagaactgcctcagactctgatttctgctacttggtca
attgaaggacctttggctgctgcaccttcacatagtgaaggttcgggttcaaaaatccat
gcaggacacaaatgtgttttggtatgtcaaagagatgcagactccggacattcagaagct
atgctgccccatccgttaccagtttctatgattcagtggagaccatctttagttacacat
tcaactagagatggcagctattctaggaggttggtgttattaacatgctgtttagatgga
gctgtaaggctctggaatgagattgatgatgggagggttagaaaagttggcaaggatagt
aatgatcacaaactgagtaaattctcttttcgtgttgtcgctgtagttgaggtaaaccaa
gcattaaatggaatgctgggcttggatgtgtctgtaagatgggcaacagatattagtggt
ttaataactgtcaatgaggaagctgtgacatattcctcatcagatgaacatcaacaaagc
aatgctggtaggtgtgaatggttgattgccataggtcctcaaacgacactgaccttttgg
gctattcattgtcttgatgatttttctccagtgagagccccaagggtgacattgtggaaa
agaaaagagttgaacagtcctaatgaggtgccaaggggattgctcttaaataaagtcctt
atcatgagaaatcaggtctttggtccaccagcagtgtgttcttttattagtctattacca
agtaactctctagcctggatgcagttatattcttcaaaattccccaaaggtgaagaggta
tcttcagaactgagtagtacagacgagtcgcctccaaataaatgtcagactgaatgttta
ctatcactatgtgcaaggggactttcaaatgcagacagtcactgcagtaaaattctgcaa
gttgcaattcatccttgtttatctgagttggaatttgctgcctccctggacactgatgga
aagctcctcttttggttgttttcttctgcttcaaatactattgtgggcctcccaactttg
agcccatcttggaaactgtttggaaaaggtgcgattgcactccctcaacaacccaagtat
acaagcttaagatgggcacccactctgttaagtgaagaccaccgtattcttgtcactgga
catgcagatggaatagatttattagtagttaaggctgtgaaaactgaagaattggaaata
gtttgtgacaaaatatgtactataccacttactgctggaagtcatgggcagggcccggat
agcgtcttttcaattccgttgccttccacttgtaacaaaactattttaaatagctttttg
ctgtttgctgtgtgggaaaaaggctttcaggcattatcgtggaaaattaaccttcatcac
tatgatttgtcggaaacacgctgtggttgcagttttgacagtggaaacaccttgcagaac
aatatatggaaatttgagagtagttattctggttataggtaccttgtctctgttgaacct
tcttcatcagttttgccagagccccatgacaatggtaagatttcaagttatgctgtgatc
tgtcccacaaactctggtttaactgaagaaatttttgctaataatttatatagcaactac
tttgcttatcatatggtcactggttgtcttgatggtaacttgctattatggagaagtgtg
cctgctgggagctcgaattctcaatgggatcttgttggtaggattgctttgcagcaaggc
cctattttggctatatctgcaagtgtctgtggcagaaaaattgcaactatctcgaaaggt
cacttaagtacttctgctattcatatatgggaatgtgcgagaattgaggacgctggcagc
tttatactagaagacactttatattttgatgcagaggttgttgcttcaaattggttgacg
atagggaatggtcagtttttacttggagtttgctcaagaggtaaggtgcaggtgtttact
caaaagcggtgtggaggtcaatgcaatttggaaccggaaaaatcatttgaaggcaacatc
tgggtatgtcttgcagcaagtgatactaaccctaccattcaagacttcttttggggaccc
aaagccatgatagtggttgttcatgatgaatatatttctctatttagcaagttctcatac
tttatgaacaagaaacttctgccccagcttggtggaaaagtctgcaagcagagttctgtc
tgtcactatggttctaataaagtgccaatattttatggtcatgaaaattgtgactatgca
cagtatcaggctaattttcccttgaaaatggaagtggtcaatgagacttcactgtttagt
agcttgacaaaatctaaagaaggctttacttctgttaaaaatgggatctggagcatttta
gagatagcagaacttgtaggaggatctcttcctcttgttcacccagaggcaattcttgta
aacttactttcaggtaattggaaacgtgcatatgtagctctgcagtgtctcagtaaacac
gtagcttccccaaagttatctgtggaaatatgctgccttcgagccttcagtggtttaata
tttcccatttcgttgtcaaactatcttgaaggacatgtcttgttaagcactggggagaag
tcatttcaatggggtggaccttcagaggttcaaaaaggtttcctccaagcttcctcaagc
tggggatatgctgcatctgataatgcgctctctatctcttctgcaagatctgaaattact
gactttctagaagcctttgataaacttcataattttgcaactatatcttccactgaaatg
atgcaaattcgagctgctattcatcttctagatgaagttagcaatatgcagtcaacttct
gcctataatagccttgatggacctggtcgaaggttttgggtttcagtgaggtttcagcag
ctgtattttgttcaacgatttggcagaccaccatcagaaggtgagctggttgtgtactcg
gggctgattggatgggctttccactctgattgccaagagaatttgtttgattctcttata
tctaaggaaccatcttggcgagaaatgcgcgatatgggtgttggattatggtatacaagt
gtggcacaactgcgagtgaagatggaaaagctggcaaggcagcaatatttgaagaataga
gatcccaaggcatgtgcacttctgtatattgcattgaataggcttcaagttttagcgggc
cttttcaagattagcaaagatgagaaagacaaacctctggttgcatttctttcacgcaat
tttcaggaagataaaaataaggcagctgctttaaagaatgcatacgtgttactggggaaa
catcagttggagcttgcaattgctttctttttgcttggaggagataccacgtctgctgtc
actgtttgtgtgaagaatcttggggatgagcagcttgcgcttgtaatttgccgacttgtt
gaaggttatggtggaatgctagagcattaccttatttcgaaattgcttctcccatctgct
cttgccaaaggtgactactggcttgcaagcgtactggagtggatattaggaaaaccctca
catgcttttcttagaatgcttgctttcccaacgggttccttgaacgataagtcaatattc
tcatcccgtcaacctgccttcttagatccaagcgttggtgacttttgcttaatgttagca
gccaaaactaccatgaagaattctattggggagcaaaatgctgctgccttgagtagatgg
gcgatcttgatgagggccactgccttaagcagatgcggtctacctcttgatgctttggaa
tgcctttcatcttctgtgagcatcattggtggttcaactggaggaagtgtgcctgataat
gttgactctggatacctgcatgaaatgctgagtgcaatgctaaatgaaacttcatcaaac
tggctatcatcggatgtggctttacggatagaatcacacatgagatcagacttgtctatg
caatacttgtctaagatgttaaggagacatccaagctgggtagaccatgatatgatatgt
cttcagggacacatggatactgtatcagagaatgaagaatacaagctttcagttgaagct
tttcaagatgaactgatgacgacaattgcatcctttcaactgaagttctccttaattcct
ctacatcttatgtacttgacttttttgtcattttgcaacggtggtttggcgtatacagga
tgctacttgttgcgcgactacataaataaatatctgtcgacggagcaaggccatgaactt
gatggttgctcattgtatgctttccttcccaagctatttcttgaagtatctggagaatta
ttttatatttctgcaagatacatcattatgtgtagcatggactgtttctacttgaagtca
ttcgcccttaggagtaatggagctgatgaaaatatttatggcgccattttagagctgtat
aaaaagaggttgtcttggtcattatggtgtcttagagccacaatgcagttttcttcagtt
tcttctgcagaaaattttgtggggacacatttcactgtccttgatttaacagagtatttg
ttactgtttgcatctgctttggtacaaagaaattacagtgttcttctcctgattgtgaag
cctctcttgatggcaagaacttcagatgagacaggcataaaggatatacaaaaactgctt
tgtgagactcgagaaacggtggctcatgatttacctattcatgatgctggatcttctgtt
cagaacaagaatcaaatgccacaggcacaatttggggatgttatgttgtctgttccggaa
gagagatggcatgtcatggttgcttctttttggggatatgtttctagctttttaaaatac
aagctaaatctgctatctccggaacatgaagaaagcggtttgtttctacctccaggcaga
catcccagtgtatccacttcactaaactgtgtaaatggcaacaatgtctcaatccacatt
gggattgttccaggacttctggcgaagatactaaagattacatgtactcacatctcttct
tactgtgtgaatcggtttgcatccatcctgctggagagcatagatccaggtgcaactact
cttttctggtctgaagattatctgtccctacataaagcgccagatactaaacttagtcat
agaaataatgatctggataagttgactgctgaagatgaattatcagcatttgaggcatta
tgggatatttgttctgagcttaagaaagctaatcagggatttgtgcttcaagaccagaag
tttttacagcataccttgctaaagtcctttaaaggatggaatgaaatgtaccccagcatt
gtaagagagtgtgaagttgaggaaacttgtgacagagacgataggtttggtagtccaagc
agcgcagctggatctcctcttgcttgtttgtcaccaaataatcatcctttccaaagttct
gggggaaaagatacgaaccatacaaagaaggttttgccttttcgtagtccgatggagata
tataagagaaatggagaacttttggaggctttgtgcatcaactccattgatcaacatgaa
gctgctcttgctagcaatcggaagggattattattcttcaattgggaagatgggcttcct
tgtgcgaacagatctgataatgtctgggcagaagctgattggccacataatggttgggcg
ggatccgattctacaccaattcctacttgcgtctctcctggagtgggtctcgggagtaaa
aagggcacacacctcgggctaggtggagcaactgttggcgcaggttttctggcaagacct
acatttgggcttccaggttatgccaatacgggtggatccaatcttggctggggagttcaa
gaggattttgatgagtttcttgaccctcctgccacagtagaaaatgttaggacaagggca
ttctcaactcacccttcaatgccttttttcttggttggctcgagcaatacacacatatat
ttgtgggagtttggcaaagatagagctactgcaacatatggagtgcttcctgctgcaaat
gtccctccaccatatgttcttgcttctgtatctgccgtgaaatttgatcattgtggtcac
agattcgtatctgctgcttcagatggtactgtgtgcacgtggcagcttgaagtaggaggc
agaagtaacattcggccaacagaatcctctctttgctttaataattatacatcggatgtc
acatatgttacgtcaagtggttcaatcatagctgcggcgggatatagctccagtggcgtt
aacgttgtcatatgggacacacttgctccaccagcgacatctcgagcctccataatgtgt
catgaaggaggtgcacgctctctagcagtgtttgataatgatttaggaagtggttctatt
tcccccctcattgtgacgggtgggaaaggtggtgatgttggacttcatgacttccggtac
atagctactggaaaggtaaaaagacagaagcatacagaaattggtgatcatggtgtgaat
tctatggttgacatgcagaagaaaaccggtgatcagaatcgtaacgggatgctctggtat
attccgaaggctcacacagggagtgttaccaaaatatcaaccataccacataccagcttt
ttcttgacgggaagtaaagatggagatgtaaaactttgggatgccaaaaatgcaaaatta
gtatttcattggccaaaattacatgaaagacacaccttcttgcagccaagctcccgcggc
tttggtggtgtggtacaggcagctgtaacagatattcaaattgttcctcatggttttctt
acatgtggcggagatggtgccgtaaagcttgtgatgctcaatgatctcttaaggctgtga
DBGET
integrated database retrieval system
