KEGG   Nicotiana attenuata (coyote tobacco): 109228167
Entry
109228167         CDS       T05870                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109228167
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nau03019]
    109228167
Messenger RNA biogenesis [BR:nau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109228167
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     109228167
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 109228167
NCBI-ProteinID: XP_019248888
LinkDB
Position
6:8233253..8235769
AA seq 129 aa
MSSSDSSEYNLFSSSLASYLDRKILILLRDGRKLLGMFHSFDQYANIVLEGTSERVMVGN
LYCDIPLGLYVIRGENVVLIGERESTEEELLPHMTCVSVAEIKRAQKADKDAAELKGSMR
KRMEFVDFD
NT seq 390 nt   +upstreamnt  +downstreamnt
atgtcttcgtcagactcatcagaatacaacttattctcttctagccttgcaagttatctt
gatagaaagattctaatattactgcgagatggcagaaaactcttgggaatgttccattct
ttcgatcaatatgcaaatatagtattggaaggtacctctgaacgagtaatggttggaaat
ctctattgcgacatacctttgggtctctacgttattcgtggggagaatgttgtgctcatc
ggagaacgggagtctaccgaggaggagcttttgccacacatgacttgtgtgtccgttgca
gaaatcaaaagggctcaaaaggcagacaaggatgcagcagaacttaagggttccatgaga
aagagaatggaatttgttgactttgactag

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