Nicotiana attenuata (coyote tobacco): 109228481
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Entry
109228481 CDS
T05870
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03082
ATP-dependent chromatin remodeling
nau03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109228481
03083 Polycomb repressive complex
109228481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nau03036
]
109228481
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109228481
Histone modification proteins
HAT complexes
HATB complex
109228481
HDAC complexes
Sin3A-HDAC complex
109228481
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109228481
PRC2.2
109228481
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109228481
Heterochromatin formation proteins
Other heterochromatin formation proteins
109228481
Chromatin remodeling factors
NuRD complex
109228481
NuRF complex
109228481
NuRF complex (fruit fly)
109228481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_DCAF12
eIF2A
ANAPC4_WD40
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
109228481
NCBI-ProteinID:
XP_019249124
UniProt:
A0A1J6I5V6
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All DBs
Position
7:complement(921714..933380)
Genome browser
AA seq
491 aa
AA seq
DB search
METTPSSQPKKRGRPKGSSTKTKEERDKEPHRMRGSITDKKAAANAIDEKYVQWKSLVPV
LYDWFANHNLVWPSLSCRWGPIVEQGALKNRQRLYLSEQTDKSVPNTLIIANCDVVKSRV
AAENHIANFNEEARSPFVKKYKTIIHPGEVNRIRELPQNKNIVATHTDGPEVLIWDIEAQ
PNKHAVYGAAASRPDLVLSGHQDNAEFALALCPMEPFVLSGGKDKTVVLWSIQDHISTLA
ADATKPAGSAGSIIKSADNPSIGPRGIFQGHEDTVEDVQFCPSSSQEFCSVGDDSCLILW
DARVGNNPVVKVEKAHDADLHCVDWNPHNDNLIITGSADNSVRLFDRRNLTSDGVGSPVH
KFEHHTAAVLCVQWCPDRTSVFGSSAEDGLLNIWDYEKVGETTDTEAKSQDDPPPGLFFQ
HAGHRDKIVDFHWNASDPWTIVSVSDDLETSGGGGTLQIWRMSDLLYRPEEEVLAELQQF
KDHVSKCAPKP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaactccttcttctcagccaaagaagcgtggcaggccaaagggttcttcaacc
aaaaccaaagaggaaagagataaggagcctcacaggatgagaggtagtattactgataag
aaagctgctgctaatgctatcgacgagaaatatgttcagtggaagtcactcgtccctgtt
ctctacgactggttcgctaatcacaacctcgtttggccttccctctcttgcaggtggggt
ccaatagttgagcagggtgctttgaaaaaccgccagcgactctatctctctgaacagacg
gataagtcagtgcctaacactttgatcatagctaattgtgacgtggtgaagtccagggtt
gcagcagaaaatcacattgcaaatttcaatgaagaagcacgctcgccatttgtgaagaag
tacaaaaccataatacacccaggagaggttaacagaatcagagaactcccacaaaacaaa
aacatagtggcaacccatactgatggtcctgaagttctcatttgggacattgaagctcag
cccaataagcatgctgtctatggtgctgctgcttcgcgtccggatctggtattgagtggc
catcaagacaatgcagagtttgctctggcactgtgcccaatggaaccctttgtcctctct
ggaggaaaggacaaaactgtggtattgtggagcattcaagaccacatttcaacattggca
gcagatgcaaccaagcctgctggatcagctggctctataattaagtctgctgataatcca
tctattggtccacgtggtatcttccagggccatgaggatacagttgaagatgttcagttt
tgcccttcaagttcacaggaattttgtagtgttggtgatgattcatgcctcatattgtgg
gatgctcgagttggtaataatcctgttgtgaaggttgagaaagcgcatgatgctgatctt
cattgtgttgactggaatcctcacaatgacaatcttatcataaccggatccgctgataat
tcggtacgcttgtttgaccggcgaaatttaacttcggatggggttggatcaccggtccat
aagtttgaacatcacacagctgcagttctctgtgttcagtggtgtcctgataggacttct
gtgtttgggagttccgcagaggatggcctcttaaatatttgggactacgagaaggttggt
gaaacaacagacactgaagcgaaatcgcaagatgatcctcctccaggcttattttttcag
catgctggacacagggataaaattgtggactttcactggaatgcatcggatccatggact
attgttagtgtatctgatgacttggagacctctggtggaggcggcacactacagatatgg
cgcatgagtgatttgttgtaccgaccagaggaggaagttttggctgagctgcaacagttc
aaggaccatgtgagcaagtgcgctcccaagccctaa
DBGET
integrated database retrieval system
