Nicotiana attenuata (coyote tobacco): 109228591
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Entry
109228591 CDS
T05870
Name
(RefSeq) KH domain-containing protein HEN4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109228591
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109228591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
Motif
Other DBs
NCBI-GeneID:
109228591
NCBI-ProteinID:
XP_019249278
UniProt:
A0A1J6IY17
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Position
7:complement(5227347..5248200)
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AA seq
705 aa
AA seq
DB search
MDEYKRNFLRQRSNPQFKRKGGSKNAKGNYPGHERSSESSRSSDTTYCILCQSKKIGSVI
GKGGSIIKALREETQAKITVADSVPGFDDRLIIISSPSTKLARRQNTDNNNENPELKEEN
GSMEPHCAAQDALLKVHNRIVEEDLHEAQEEDKNEIVIVTRLLVPNNLVGCLLGRKGDVI
QKLRSETGASIRVQSAEHLPACAMTTDELVQISGKPALVRKALYEVSTLLHQNPRKDKPT
SSFPMVHGAQGFHPPGLPVENMIPPGKSMWSRSRSNLNGMPPVLGVGGYSNQPGFGRPDF
DYDPPPCAGEAPSDFTMKILCSAAKIGGVIGKGGFNVKQLQQETGASIHVEDVVPESDER
VIHVSSLESLWDPRSQTIDAILQLQSKTSEFSDKGIITTRLLVPSNKVGCILGQGGQVIN
EMRRRTQADIRVISKDDKPRCASADEELVQISGSFGVAKDALVEIASRLRTRSLRDVNSK
AESGPVRRLSGFGPSEDFRSGDPQRSGVMEAGSSRRYDHLKGAVREYDHPSYQDLPIATR
YSSISSPLEVKFPDHSFGSAKRTGGYNINEVAGSRARFQDPRSINPGFIDDIRGTSDYTN
AGHNVFPGSSGNLNAGRPTFQGYESPAGQSSNIQQGAYHQSYPAQQSAYQSSTAKSGYPS
GSPSQLPYQNYNPHQAPYQSMNSQQPQYQQPPSYQNMTAQGSYHY
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatacaaaagaaattttctcaggcaacgctctaacccccagttcaagaggaag
ggaggctctaaaaatgcaaaggggaattatcctggtcatgaacggtcatctgaaagttct
cgaagttcagatactacctattgtatactttgtcaatccaaaaaaattggtagtgtaatt
ggaaaaggtggtagcataatcaaagccctgagagaggaaactcaagcaaagattacggtt
gctgacagtgtgcctggttttgatgatagactaataattatctctagtccctctacaaag
ctagctaggagacaaaacactgacaacaacaatgaaaatccagaattaaaggaagaaaat
ggtagcatggagccacattgtgcagcgcaagatgctctgttaaaagttcacaataggatt
gttgaagaagacttgcatgaagcacaagaagaggataagaatgaaattgtaatcgtcaca
cgtctacttgtgccaaacaatttggttggatgccttttaggaagaaaaggcgatgttatt
cagaaattgcgaagtgagactggggcaagcattcgtgttcaatctgctgagcatcttcca
gcttgtgctatgaccactgatgaattggtccaaatatcaggtaaacctgctttggtaaga
aaagccttgtatgaagtatcaactctgttgcatcagaatccacgcaaagacaaacctacc
tcgagttttcccatggtacatggtgctcaaggttttcacccccctggtcttcccgtggaa
aatatgattcctccaggaaaatcaatgtggtctcgaagtagatctaatttaaatggtatg
ccgcctgtgttaggggtgggagggtatagcaaccagcctggatttggtcgtccagatttt
gattatgatcctcccccttgtgctggtgaagctccaagtgatttcaccatgaaaattctg
tgttcagctgcgaaaattggtggcgttataggcaaggggggcttcaatgtaaaacaactg
cagcaggaaacaggagcaagtatacatgttgaggatgtcgtaccggaatctgatgaaaga
gttattcatgtctcctctttggagtctctgtgggatcccagatcacaaactattgatgcc
attcttcaacttcaaagtaaaacaagtgaattttctgacaaaggaattatcactacaagg
cttcttgttccctcaaataaggttggatgcattcttggtcaaggaggacaggttatcaat
gagatgaggagaaggacacaagcagatattcgtgttatttccaaggatgataaacccaga
tgcgcatctgcagatgaagagcttgtgcagatatctggaagctttggtgtggcaaaagat
gccttggttgagattgcttctaggcttagaacaagatcccttagggatgtaaatagcaag
gcggaatctggtcctgttaggcgactttctggatttggtccttcagaggatttccgaagt
ggagatccacaacgttcaggtgtgatggaagcgggcagctctagaagatatgatcatttg
aagggtgctgttcgtgaatatgaccatccgagttatcaagatcttcccattgccactaga
tactcaagtatcagtagtcccctggaggtgaagtttccggaccattcatttggctctgca
aaaagaacaggagggtacaacattaatgaggttgctggaagtagggcaagatttcaggat
cctcgttctatcaatcctggatttattgatgatattcgggggacttcggattatacgaat
gctgggcacaatgtttttcctgggtcttcagggaatttgaatgcgggccgccctactttt
caaggatacgagtctcctgctggacagagcagcaatattcagcaaggcgcttaccaccag
agttatcctgctcaacaaagtgcctatcaaagttctacagctaaaagtggctaccctagt
ggtagtccttcccaattgccttaccaaaactataatcctcatcaagctccatatcagagc
atgaactcacagcagccgcagtatcagcagccgccgtcataccagaacatgactgcacaa
ggttcctaccattattga
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