KEGG   Nicotiana attenuata (coyote tobacco): 109228638
Entry
109228638         CDS       T05870                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109228638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nau03019]
    109228638
   03041 Spliceosome [BR:nau03041]
    109228638
Messenger RNA biogenesis [BR:nau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109228638
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109228638
Spliceosome [BR:nau03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109228638
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2 Spo7_2_N
Other DBs
NCBI-GeneID: 109228638
NCBI-ProteinID: XP_019249342
UniProt: A0A1J6I6C5
LinkDB
Position
7:complement(7492432..7495776)
AA seq 338 aa
MGSRKTDFGDGASPGKIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRYTGRPRGFGF
ITYEDPSVVDTVIAENHIINDKQVEIKRTIPKGSAESKDFKTKKIFVGGIPTTMTEDEFK
NFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLAEGNRIDMMGTQVEIKKAE
PKKPSNPASAPAYGSDSRGRGYGDSYGGFGNSYSGFGSGGFGPASYRSFGARFGEYGYGG
GEFGGRYGDFGGSDFGGYRGDPSLGYSSRFGSYAGGFGGGYGGSGLGSYGRGGGYGGYGG
VGPDASYESGGAGYGGPGGLYGSRAGYSGSGRYHPYSR
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggttccagaaagaccgatttcggcgacggcgctagtcctggaaaaatctttattgga
ggtctagcgaaagagacaacgttagaacaatttgtgaagtactttgagaagtatggggag
ataatagactcggtgattatgaaggataggtatactggtagacccagaggttttgggttc
atcacttacgaagatccatccgttgtagacactgttatagccgaaaaccatattatcaat
gacaaacaagttgagattaaaagaaccattccgaaaggatctgctgagtcaaaggatttt
aaaacaaagaagattttcgttggtggcattccaactaccatgactgaagatgaattcaag
aactttttctccaagtttgggaaagtaacagagtacgagatcatacgagatcatgtgtcc
aagcgttctagaggttttggatttattgtgtttgacaatgaacaagtagttgataattta
ctggctgagggaaataggattgacatgatgggtactcaggttgagatcaagaaggcagaa
ccaaagaaaccctcaaacccagcatctgctcctgcatatggtagtgactctagggggcgt
ggatatggtgatagttatggaggatttggcaattcatatagcggttttggcagtggcggt
tttggccctgcttcttataggtcgtttggagctaggtttggtgaatatggatacggtggc
ggtgaatttggtggtagatatggagactttggtggtagtgattttggtggttaccgtggg
gacccgtcacttggttattctagtcgttttggctcttacgctggtgggtttggtggggga
tatggtggcagtggactaggttcatatggccgtggaggtggttatggaggttatggtgga
gttggccctgatgctagttatgaatctggcggtgctggttacggtggaccaggaggttta
tatggaagtagggcaggctatagtggcagtggccgttaccatccttactccaggtag

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