Nicotiana attenuata (coyote tobacco): 109228738
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Entry
109228738 CDS
T05870
Name
(RefSeq) uncharacterized protein LOC109228738 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03030
DNA replication
nau03410
Base excision repair
nau03420
Nucleotide excision repair
nau03430
Mismatch repair
nau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109228738
03410 Base excision repair
109228738
03420 Nucleotide excision repair
109228738
03430 Mismatch repair
109228738
03440 Homologous recombination
109228738
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nau01009
]
109228738
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nau03032
]
109228738
03400 DNA repair and recombination proteins [BR:
nau03400
]
109228738
Protein phosphatases and associated proteins [BR:
nau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109228738
DNA replication proteins [BR:
nau03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
109228738
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
109228738
MMR (mismatch excision repair)
DNA polymerase delta complex
109228738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
109228738
NCBI-ProteinID:
XP_019249471
LinkDB
All DBs
Position
7:complement(14687654..14694202)
Genome browser
AA seq
535 aa
AA seq
DB search
MRNNPGAIARGRWKLDQDMNPRILAEEEEIFERREKLYFIQGIPNVSYKWLSRNFLVSSD
SAKRLLQEFVEKHGNGLEVVYSLSGWLKTSPSTYHIRLVSTPNLAEAKKELSDDCSVQVY
SVQACIPKDPVALWNAEFVQAEELFRQPLSVDNCLLDNRFCGVSNPFVKRNGGGTIPSTA
TVPQVKSGALGLRKSNSTAQAQPEQKKVQVPSPSANVPSTNVVDAKSESRGTSGPGQGSK
LAAEKDKVAQLPAAKKIVQSDKSSAKNGGALANMWGRVSTKPKADSVSAATSDATPNPAD
NAAQICTPEVVEDRVSDDDDQQVSIRRTSNGEGNRKRRVIFDFSDEEDEFKDAVNLASPD
PPKQKSILGSKQSPSTLELEKQEVKKAKEASTKSHEREREPLPTSESEKSKLSSSDMISE
HVSLKNATVKDEVADAAPVSPKRRKVLKTRIDERGREVTEVVWEGEDAEAKVDGNTMKKP
DDKPVNSTGDRPPMAKKSPALGSTAPMHQPGKAGNKKAGNKDPKQGNILSFFKKT
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacaatccaggagctatagctcgaggaagatggaagctagatcaggatatgaat
ccgagaattctagcagaagaagaagaaatttttgagaggagagagaagttatatttcatt
cagggaatcccaaatgtttcatacaagtggctgagtcgaaattttttggtgtcatcagat
tctgcaaagaggttgcttcaggaatttgttgaaaagcatggaaatggtcttgaggtagtc
tatagcttgtctggctggttgaaaactagcccctcaacctaccatataagacttgtctct
actcctaacctcgcagaagccaagaaagaattatcagacgattgctcagttcaggtctat
agcgtgcaagcttgcatccctaaggatccagtggccctttggaatgctgaatttgtccag
gctgaagagctctttaggcagcccctctcagttgataattgtttgcttgacaatagattt
tgtggagtttcaaatcctttcgtcaagcgcaatggtggaggaacaattccaagcactgct
actgttcctcaggtgaaaagtggagcattaggacttcgtaaaagtaactctactgctcaa
gcacaacctgagcagaaaaaggttcaggtaccaagtcctagtgctaatgtgccatctacg
aatgtggttgatgccaaaagtgagagtcgtggcacatcaggtcctggacagggtagtaag
cttgctgcagaaaaagacaaagttgctcaactgccggctgctaagaagatagttcagtct
gacaaaagttctgctaaaaatggcggggcattggctaatatgtggggtcgtgtatccaca
aagccaaaagccgacagtgtttcagctgctaccagtgatgccacaccaaatcctgctgat
aatgcggctcaaatatgtactccggaagtagtagaagatagggtcagcgatgatgatgat
caacaagtcagcatcaggagaacatcaaatggtgagggaaatagaaagaggagggtaatt
tttgatttttcggatgaagaagatgaattcaaggatgccgtcaacctagcatcacctgat
cctccaaagcagaaatctattttaggatcaaaacaaagtcctagtactctagaactggaa
aagcaggaagtcaagaaggcaaaggaggctagcaccaagagtcatgaacgagaaagagaa
cctttacctaccagcgaatcggagaagtctaagttgtcctcttcagatatgatttcagaa
catgtcagtcttaagaatgcaactgtaaaggatgaagtggctgatgctgctccagtttcc
cctaaaaggagaaaagtattgaagacacgaattgatgaacgtggaagagaagtgaccgaa
gttgtttgggagggtgaagatgcagaagcaaaggttgacggtaatacaatgaagaaacct
gacgacaaaccagttaatagtactggtgacagaccacctatggctaagaagtctcccgca
ctgggaagtactgcacctatgcatcaaccaggtaaagcaggaaacaagaaagcaggaaat
aaggatcctaagcaagggaatattctatcatttttcaagaagacttag
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