Nicotiana attenuata (coyote tobacco): 109228829
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Entry
109228829 CDS
T05870
Name
(RefSeq) uncharacterized protein LOC109228829 isoform X1
KO
K17925
sorting nexin-13
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nau04990
]
109228829
Domain-containing proteins not elsewhere classified [BR:
nau04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
109228829
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
DUF7261
AAA_lid_13
Motif
Other DBs
NCBI-GeneID:
109228829
NCBI-ProteinID:
XP_019249605
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Position
7:24884051..24893210
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AA seq
1128 aa
AA seq
DB search
MSTERQAAVTVRDLVEEAKKRVVVFIICAIGLSYLMSLTSSSVFINLPAAALLIVFLCYL
SLDFDARMKAATYKRKSSVSNNTSQRKHIDAPRAVNEKANWRKKVNSPAVEEAIDHFTRH
IVSEWVTDLWYSRITSDRQGPEELVQIMNGVLGEISCRARTINLIDLFTRDIISLICTHL
ELFRASKMRILKKLPRSLTIEELDVELKLVLAADDKLHPALLSPEAEHKVFQHLMDGLLS
YTFETEEVQCCLFHYIVRELLACVVIRPVLNLANPRFINERIESLVVSINKADKGTTATE
TEPQSMPIGSGKIPADHFSQVLDPSAKGVELVQLKKDQPNNTEEHAMDSVNVTDLSKDTL
LSIDPRSTRSWSSLPSEIDADDGRGIQRHHSGGEWGEMLDLLSRRKTEALAPENLDNIWA
KGRNYKRKEEANLASDTLKKSLLVGAPKLLGHSKEAKQKESERENKIGAKHYVKDNTSSQ
GVLNRPSYPPDYLYQDENEHNSDDLESESSSSYTTEDEKPSTVTGLDSPGTQVSDGKNIR
NVNHIHHPLENNEGHKRRKGKSGKVHIRSKHLNRVLSGRKRSRVSNQTGHVWQEIQRTSF
SLGDGQDILNSKENVKLDGLSDDSVTEIFGRISSDTTASASSSALSRSILENLNMGPHSA
NGSVIADSFLKLRSEVLSANIVRCGSKTFAVYSISVTDMNNNSWSIKRSCRFRHFEELHW
CLKEFREYNLHLPPKHFLSSSLNVPVIRERCKYLDLYLKKLLLLPTVSSSIEVWDFLSVD
SQTYSFSNSLSIIETLPVDLDGTVRQMSKEPPPGISPRTDLLSSKGERSNTESKNPTLRM
EQDHSVHESGLRKNYLALSPPKRPLKETFEDSTRDHKVHTNRKSTPNMQTSSKPVETNSH
ASPESLVDVPIDPAFPSEWVPPNLSVPILDLVDVIFQLQDGGWIRRKAFWVAKQVLQLGM
GDAFDDWLIEKIQRLRRGSVVAAGIRCVEQILWPDGIFITKHPTRQRPGPSPSPNSPQGQ
VSTPLSSPSVEDSLKLDEMQQQEAQRRAKLVYELMIDKAPAAIVGLVGHKEYEQCAKDLY
YFIQSSVCIKQFVLDLLELLLLSAFPELTSVFNALHEEKGKFGELKIE
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggaaaggcaggccgcggtgacggttcgggacctagtagaggaagctaagaaa
cgagttgttgttttcatcatatgcgccattggactgtcctatctcatgtctctgacgagc
tcctcagtttttatcaacttgcctgctgctgctctcttaattgttttcctttgttatctg
tctcttgattttgatgcgcggatgaaagctgctacatataaaagaaagtcatccgtatca
aacaacacttctcagaggaaacatattgatgctccaagagcagttaatgagaaggccaat
tggaggaagaaagtaaattcacctgctgtagaagaagcaatagatcacttcaccagacat
atagtttctgagtgggtgacagatctctggtactcccgcataacttctgatagacaggga
cctgaggaacttgtgcagatcatgaatggtgtactaggggaaatctcatgtcgcgcgaga
actattaatcttatagatcttttcacaagggatattatcagtctaatatgcactcatttg
gagctgtttcgtgcaagcaagatgaggattctgaagaaactgccaagatccttgacaatt
gaagagcttgatgtggaacttaaactggtgttggctgcagatgacaagttacatcctgct
ttactttctccggaggctgagcacaaggttttccagcatctcatggatggtctcctttca
tacacttttgagacagaggaggtgcagtgctgtttattccactacattgtcagggagctt
cttgcttgtgttgtaatacgaccagtgttaaatttagcgaacccgaggttcattaacgag
aggattgagtctttagttgtttctataaataaggccgataaaggaaccacagcaacagaa
acagaaccacagtccatgccgattggatctggtaaaataccggcagatcatttttctcag
gttttagatccttctgctaagggtgtagaacttgtacaattgaaaaaagaccaacctaat
aatactgaggagcatgccatggacagtgtgaatgtaacagatttgtcaaaggacactttg
ctttcgattgatcctcggtctactcgttcttggagttctttgccatcagaaatcgatgca
gatgacggaagaggtattcagagacaccactctggaggagagtggggtgaaatgctagat
ttgctttctcgtagaaagaccgaagcccttgctcctgaaaatttagacaacatatgggca
aaaggcagaaactataaacggaaagaagaggccaatctagcatctgatacactcaaaaag
agtttattggtaggtgcaccaaaactgctgggacactcaaaggaagctaaacagaaagag
agtgagagagaaaacaagattggagctaagcattatgtgaaggacaatacttcctcgcag
ggtgttttgaacagaccaagttatcctccagattacttgtatcaagacgaaaatgaacat
aactcagatgaccttgaatcagagagcagtagttcttacactactgaagatgaaaaaccc
agcactgtgacaggtcttgactctcctggcacccaagtgtcggatgggaaaaatataagg
aatgtaaatcacattcatcatccacttgaaaataatgaaggccataagagaagaaaagga
aaatctggtaaagtacatatccgctctaaacacttaaatagagtactgtctgggcggaaa
aggtctagagtaagcaaccaaacagggcatgtgtggcaagagatacaaagaaccagcttc
tcactgggggatgggcaagatatattaaattccaaagaaaatgtgaaactggatggttta
agtgatgactccgtgacagaaatattcggtagaatttctagtgacacaactgcatctgca
tcatcatctgccttgtcgagaagcattttggaaaatcttaatatgggtcctcattctgca
aatggttctgtaattgctgattcttttttgaaattaagaagtgaggtcctgagtgcaaat
attgtaagatgtggctccaaaacttttgctgtttattccatatctgttacagatatgaac
aataatagttggtctatcaaaagaagttgcaggtttcgacattttgaggagctacactgg
tgtcttaaagagtttcgggagtacaatcttcatttacctcccaagcatttcctctcttca
agtctgaatgttcctgtcattcgagaacggtgcaaataccttgacttgtatttgaagaaa
cttctgctgctcccaactgtttccagttccatcgaagtatgggacttcctcagtgtggat
tcacagacatatagcttctcaaactccttgtccataattgaaacattaccagttgacctg
gatggcactgtacgtcaaatgagtaaagaacctccaccaggtataagccctcgaacggat
ctcttatcctccaagggggagcgttctaatactgaaagcaagaatccaactttaaggatg
gagcaagatcattcggtacatgaatcaggattaaggaaaaactatctcgcactctctcct
ccaaaaagacctctcaaagaaacttttgaggattcaactagggaccataaggtgcataca
aatagaaaatcaaccccaaacatgcagacgtcatcaaaaccagttgaaactaactcacat
gcatcacctgaatctctcgttgatgttcccattgatcccgcctttcccagtgagtgggtg
ccaccaaatttaagcgtgcctatattagatcttgttgacgtcatttttcagcttcaagat
ggtggatggatcaggaggaaggcgttctgggtggctaaacaggttttacaattgggaatg
ggtgatgcatttgatgattggctgattgagaaaatccagcgtctgcgcaggggttcagtt
gttgctgcaggtatcagatgtgttgaacagattctctggccagatggtatattcatcaca
aagcacccgacacgacaacgtcctggaccctctccatcccctaattctcctcaaggccaa
gtttccactccattaagttcaccttcggtggaggattcactgaagctggatgagatgcaa
cagcaggaagcacaacgacgtgcaaaacttgtttatgagctaatgattgataaggcacca
gctgctattgtagggcttgttggtcacaaggaatatgaacaatgtgcaaaggatctttat
tacttcatccagtcatccgtgtgtataaagcagtttgtccttgatcttcttgagttacta
ctgttgtccgcgttcccagagctgacttctgtatttaacgcattgcacgaggagaagggg
aagtttggagaactcaaaatagaatag
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