Nicotiana attenuata (coyote tobacco): 109229386
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Entry
109229386 CDS
T05870
Name
(RefSeq) probable pectate lyase 18 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109229386
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109229386
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109229386
NCBI-ProteinID:
XP_019250351
UniProt:
A0A1J6I902
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Position
7:complement(81748009..81750517)
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AA seq
406 aa
AA seq
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MAISSFSPLFLLSYLLLIPSHFASSTLQNPQSVVDHVHSSINNASRRNLGYLSCGTGNPI
DDCWRCDPNWEKNRQRLAECAIGFGKNAIGGKDGKIYVVTDSGNDDPVNPKPGTLRYAVI
QNEPLWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIACGPCITMQYVTNIIIHGIHIH
DCKQGGNTMVRSSPQHYGWRTISDGDGVSIFGGSHIWVDHCSLSNCKDGLIDAIMGSTAI
TISNNYMTHHDKVMLLGHSDSHVQDKNMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSANPTINSQGNRFLAPDIRFSKEVTKHEDAAESEWKKWNWRTDGDLMLNG
AYFVQSGAAASSSYAKASSLSAKPSSLITSIVSGAGALTCRKGSPC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccatctcctctttttctccccttttcctcctgtcctatcttctcttaattccttct
cattttgcctcttctaccttacaaaatccccaatctgttgttgatcacgtacatagcagt
ataaacaatgcctcaaggaggaacttgggctatctctcttgtggcacgggaaaccctata
gatgattgctggcgttgtgatcccaactgggaaaagaaccgccaaaggctagctgaatgt
gctattggctttggcaagaatgccattggcggcaaagatggcaagatttacgtggtcact
gattccggcaacgacgatcctgttaaccctaaaccgggcactctccgatatgctgtcatt
caaaacgagccattatggatcatttttgctagggacatggtgatccagctgaaagaagaa
cttattatgaactcattcaagactattgatggaagaggagctagcgttcatattgcatgt
ggaccatgcataacaatgcaatacgtgaccaatattatcatccatggaattcacatacat
gattgtaagcaaggtgggaatactatggtgaggagctctccacagcattatgggtggagg
actatatcagatggtgatggagtatccatttttggggggagtcatatatgggtagaccat
tgttccttgtcaaattgcaaagatggtttgattgacgctattatgggttccactgcaatt
accatttctaacaattacatgactcaccatgataaagttatgctgttgggacacagtgat
tcccatgtccaagacaagaacatgcaagtaacagttgccttcaatcactttggagaaggc
cttgtccaaagaatgccaagatgtagacatggttactttcatgtggtgaacaatgactat
acccactgggaaatgtatgctattggtgggagtgctaatcccaccatcaatagccagggc
aacagattccttgctcctgatatcagatttagcaaagaggtgacgaagcatgaggatgca
gcagaaagcgagtggaagaaatggaattggagaacagatggggacctaatgttgaatggt
gcatatttcgttcaatcaggagctgcagcctcttcaagctacgccaaggcttcaagcttg
agtgctaaaccctcttccctaataacctccattgtttccggtgccggcgcccttacttgc
cggaaaggttccccttgctga
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