Nicotiana attenuata (coyote tobacco): 109229641
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Entry
109229641 CDS
T05870
Name
(RefSeq) F-box protein SKP2A-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109229641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109229641
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109229641
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_8
LRR_13
Motif
Other DBs
NCBI-GeneID:
109229641
NCBI-ProteinID:
XP_019250705
UniProt:
A0A1J6I8N3
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All DBs
Position
7:106109268..106113123
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AA seq
367 aa
AA seq
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MMIGLGVEELSFEKLMVNNNSSGGGCKMGGGGVIREWKDIPMELLLRIVTLVDDQTVIVA
SGVCSGWRDAISWGLTHLSLSWCKRNMNNLVLALAPKFTKLQVLSLRQDLPQLQDNGVET
IAIHCHELQDLDLSKSFKLTDRSLYALAHGCPNLTKLNISGCSAFSDTAVAYLAERCRKL
RVLNLCGCVKAATDKALKAIGYYCNRLQTVNLGWCDKVGDEGVMSLAYGCPDLRALDLCG
CVLITDESVIALANNCPHLRSLGLYFCQNITDRAMYSLAQSRVKNKHEIWASMKKNRYED
EGLMNLNISQCTALTPPAVQAVCEAFPALHTCPGRHSLIISGCLNLTSVHCACSVQAHRA
RVLHPAH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgatgataggattaggggtggaggagttgagctttgagaagctgatggtgaacaataat
agcagtggtgggggttgtaaaatggggggtgggggtgtgatcagagagtggaaagatata
cctatggagttgttgttgaggatagttacacttgtggatgatcagacggtgattgttgct
tctggtgtttgcagtggatggagagatgctatttcttggggcctcactcacctttccctt
tcttggtgcaagaggaatatgaacaatttagtgctggcacttgcccccaagttcacaaag
ctacaagttctaagtcttcggcaagatttaccacaacttcaggataatggtgtagagaca
attgcaattcactgtcatgaacttcaagaccttgatcttagcaagagttttaagctaact
gaccgttcgctctatgctttagctcacggctgtccaaacctcacgaagctgaacatcagt
ggatgctctgctttcagtgacactgctgttgcatacctcgctgagcgttgcagaaaacta
agagtcttgaatctctgtggctgtgttaaagctgcaactgataaggcattgaaggctatt
ggttattactgtaaccgactgcagactgtgaatctaggttggtgtgataaagttggtgat
gaaggtgtaatgagcttagcttatggctgtcctgatctcagagcccttgatctttgtggc
tgtgttcttataacagatgagagtgtcattgctttggcgaacaactgccctcacctaaga
tccctcggcctgtacttctgccagaacatcacagacagagcaatgtactctttggcccag
agtcgggtcaagaacaagcacgagatttgggcgtctatgaagaagaacaggtacgaggac
gaagggcttatgaatttaaacatcagccagtgcactgctctcacgcctccagccgtccag
gcagtgtgcgaagcattccctgccctgcacacttgccccgggagacattccctcataatt
agcggctgcttgaacttaacatcggtgcactgtgcatgttctgtccaagcacaccgggca
cgcgttctccatccagctcactga
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