Nicotiana attenuata (coyote tobacco): 109229664
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Entry
109229664 CDS
T05870
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109229664
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109229664
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109229664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_11
zf_RING_Vps8
zf-RING_16
DUF2457
CDC45
Motif
Other DBs
NCBI-GeneID:
109229664
NCBI-ProteinID:
XP_019250735
UniProt:
A0A1J6J296
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Position
7:108167384..108184437
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AA seq
657 aa
AA seq
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MADDADPDYERFLHLIGVGGDEGGDVELAEDVGFLEDDAEYEEEEEEEETEEEEEEEEQR
EEEDEEDDEEEEDEEVGNEESSTGRTTLRTVLYGNRSAATISSQQQAINAENFHNSAMES
EDVTRRTKSGGKASQDVDKEEGDGGEVEGEWNRSEIEGLFCPICMEAWTNDGDHQICCLP
CGHIYGLSCIKKWLQQKGSLGKCPQCNKKCTLKGVRVLYASRLHAVDEELQKKIRSLESR
CFSLEKECSDWCKKEVEWRRREAELHKQVEHLKERITCVEGSQSETQSRSSGHIFGRNID
SKLGRREYANAFVLQKEFRIDGARLFDVDSNGENLMIARRIAGMGGQHMLTKISLLPPHE
REDILLPASMKTIKDLHVSPHERVILLASLGKKLSVLSAENNHAVLTYDLPTVPWSCSWD
PNNSHYMYAGLQNGMVLQFDGRQTARPVECMTGLTGNPVHTVCSLSADPTVGAGVRSVLS
ASSVGLCHWNFGSSEERPCLVPESENQGICISLACGDRNDDIVASFRPKLEIIGDMAASQ
VPLTPPVMEQAVEGSHVLYRRVGSRYQKLGASCAKVSGIRLPKSAIIDRGNQNPLFASGD
EATMELVLQELPSLNVAQRVKSLNGPIRDVRYTRLLNTGLLGCLSDDNLQICSTKLQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgacgccgacccggattacgagagattcctccacctaatcggcgtcggcggc
gacgagggtggcgatgttgaactggcagaggacgtcgggtttttagaagatgatgcagag
tacgaggaagaagaagaggaagaagagaccgaagaagaagaggaagaagaagaacaacga
gaagaagaagatgaagaagacgacgaagaagaagaagatgaagaagttggcaatgaagag
tcgagtactggaaggacgacattgcgtacggttttgtacgggaatcgtagtgctgcaaca
atttcatctcaacagcaggcgattaatgccgagaattttcataattccgctatggaaagt
gaagatgttacgaggaggaccaaaagcgggggaaaggcgtcgcaagatgttgataaggaa
gaaggcgatggaggcgaagtagaaggggagtggaatcggagtgagattgaaggtttgttt
tgcccgatttgcatggaagcttggaccaacgacggcgaccaccaaatctgctgccttcct
tgtgggcatatatatggtttgtcatgtatcaagaagtggttgcaacaaaaaggaagttta
ggaaagtgccctcaatgtaataagaaatgcacattgaagggtgtccgagtgctttatgct
tctcgtcttcatgctgttgatgaagagcttcaaaagaaaatccggtctcttgaatctaga
tgtttttctcttgaaaaagagtgcagtgattggtgtaagaaagaagtagagtggaggagg
agagaagctgagttgcataagcaagtggagcacctcaaagagagaataacttgtgtagag
ggctcgcaaagcgagacgcagagcaggtcatctggacacatttttggacgcaatattgac
tccaaattgggaagacgtgaatatgcgaatgcttttgttttacagaaagaatttcggatt
gatggtgctcgcctatttgatgtggatagcaacggtgagaatttgatgattgctagaagg
atcgctggaatgggaggacagcatatgcttacgaaaatcagcctattacctccgcatgaa
agagaagacattctgcttcccgcgagcatgaaaactatcaaggacttgcatgtttctcct
catgaaagagtcatactcttggcttccttagggaagaaattgtcagttcttagtgctgaa
aacaaccatgctgttctgacatacgacttaccgactgttccttggtcatgttcgtgggat
cccaacaattcgcattacatgtatgccggattacagaatggtatggttttgcagtttgat
ggacgtcaaactgcgaggccagtggaatgtatgactgggttgacaggcaatcctgttcat
actgtgtgctctctttcagctgatcctacagttggcgccggcgtcagaagtgttctttct
gcatcttcagtaggcttgtgccactggaactttggtagcagtgaagaaaggccgtgcttg
gttcctgaatcagagaatcaaggaatctgtatatctctcgcttgtggagatagaaatgat
gacatagttgcctctttccgtcctaaactggagatcattggcgacatggctgcttctcaa
gtaccgcttactcctccagtaatggagcaagccgtagagggttctcatgttctttatagg
agagtgggtagcagataccagaagttaggagcttcttgtgccaaagtgagtggcattcga
cttccaaaatctgctataatagatagagggaatcagaaccccttgtttgcttctggtgat
gaagcaacaatggaactggtgttacaagaattgccatctttaaatgtggctcagcgtgtt
aaatccctcaatggtcctattcgtgatgtgaggtatacacgactcctaaatacagggttg
cttggttgtttgagtgacgataacttgcagatttgctcaaccaagcttcaatga
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