KEGG   Nicotiana attenuata (coyote tobacco): 109229667
Entry
109229667         CDS       T05870                                 
Name
(RefSeq) protein GLE1 isoform X1
  KO
K18723  nucleoporin GLE1
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03013  Nucleocytoplasmic transport
nau03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109229667
   03015 mRNA surveillance pathway
    109229667
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nau03019]
    109229667
Messenger RNA biogenesis [BR:nau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109229667
SSDB
Motif
Pfam: GLE1 DUF4633
Other DBs
NCBI-GeneID: 109229667
NCBI-ProteinID: XP_019250739
LinkDB
Position
7:108299501..108315856
AA seq 638 aa
MGSVKLQLPLPKNVDGVTLDPNPDWSFDALLVELNSIEKKLNGSSKFPIPFTKAKSRELS
ASKNNSRRGFIMQVSDDDMEDLERDTKDEVGDHFVMGGKRFACDEIYLSDSDHSEEGLGI
ELQHDLMDKVGLVESALSELAHEHQLTIAEEMRDQLSALEAELMDENEKLASTLERVERN
IEAQREMNRKFDMQYQRKIAEALDDHLTAVQRDHEHRSQIEERRIRDDAAREEAKRKEKA
LQEEKARQEMIRAEAKVQARLEAERVEQEKATALEAERKAAKEAAAAVEKKASESLMNAP
SEANKVPKEVTSHKHSAAGNTIRVSENAQKLEEKRLMIYNEIASQNEALGLGSNKAYRKY
EMEIARRIRTITGTKENVRVKADELIKLMSDPTCPQSISIAMFAQKVVSLCVNPTGSFNS
AVYAYGRVIVLVTSKVSLAMDVLIGELNKVCIYAVPKYIVYSEAAFQTKEAYYKAIGYAE
EDGKIESTDSYVDRLSAYMKLYGALVQTEVEGCQNLHGLREGWAWIARFLNVLPANLYTA
AALQAFLEMAGFALHKRYKTQFRKMLDIIAKDFLTALKDRGDAKLNKVIVNIRNYIESNQ
FLKEPEGWRLRSNLESHNFTPESDHQQQYGYQQNNYYR
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgggttctgttaaactgcaacttccgttgcctaaaaatgttgatggagtgaccctggat
ccaaaccctgattggagctttgatgctttattggtcgagcttaactcgatagagaagaag
ctcaatggatcatcgaaatttccaataccttttaccaaagcaaaatctcgagaactctcg
gcttcaaagaataattctcggagaggctttattatgcaagtgtctgatgacgacatggag
gatttggaaagagacactaaggatgaagttggtgatcattttgttatggggggaaaacgt
tttgcctgtgacgaaatctatctgagtgatagcgaccattctgaagaaggcctgggcatt
gaactgcaacatgatctaatggataaagtgggattagtagaaagtgctttatctgaatta
gctcatgagcaccagcttactattgcggaggaaatgagagatcaactttcagcacttgaa
gctgagttaatggatgaaaatgagaagcttgcctccacacttgaacgggttgagagaaat
attgaagctcaaagggaaatgaacagaaaatttgacatgcagtaccaacgtaaaattgca
gaagcacttgatgatcacctaactgctgtacaaagggatcacgaacacagatcccaaatt
gaagaaaggagaataagagatgatgcagctcgtgaagaagccaagaggaaggaaaaagca
cttcaagaagaaaaagcccggcaagaaatgatcagagcagaagccaaggtgcaggctagg
ctggaagctgaaagagttgaacaggaaaaagccacagctctggaagctgagaggaaagca
gcaaaagaagctgcagctgctgtggagaagaaggcatctgagtcattgatgaatgctcct
tcggaggctaacaaggttccaaaggaagtcactagtcataaacattcagcagcaggaaat
acaatcagggtgtcagaaaatgctcaaaagctggaggagaaaagattgatgatttacaat
gaaatagcttcacagaatgaagcactgggattgggttctaacaaggcttaccgaaaatat
gaaatggaaatagccagacgaatcagaactatcactggtacaaaagaaaatgtcagagtg
aaagcagatgaattaattaagctaatgagtgatccaacatgtccacaatccatcagcatt
gcgatgtttgcacagaaggttgtgtccctgtgtgtgaacccgacaggaagctttaacagt
gccgtctatgcgtatggtcgtgtaattgtccttgttacttcaaaggtctctcttgccatg
gatgttctcataggcgagttgaataaagtttgcatttacgcagttcctaagtacattgtt
tactcagaggcagcatttcagacaaaagaagcttattataaagctattggctatgcagag
gaagatgggaagatagaaagtactgatagttatgtggatcgcttaagtgcatacatgaaa
ttatatggtgctcttgttcagactgaagttgaaggctgccaaaacttgcatggcctcaga
gaaggttgggcatggatagccagattcttaaatgttctcccagcaaatttatatactgca
gctgccttgcaggcttttcttgaaatggcaggttttgctctacacaaaagatataagaca
caattcagaaagatgttggatatcattgctaaagattttctaactgcattgaaagatcga
ggcgatgcaaagttgaacaaggtgattgtgaatatccgaaactatatagagtcaaatcag
ttcctgaaggaacctgaaggatggcgcctcaggagtaacttggaatcacacaatttcact
ccagagtcggatcatcaacagcaatatggttaccaacagaataactactatcgctag

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