Nicotiana attenuata (coyote tobacco): 109229696
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Entry
109229696 CDS
T05870
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109229696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nau03009
]
109229696
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
Pre-60S particles
RNases
109229696
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GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RRM_1
BRAP2
Motif
Other DBs
NCBI-GeneID:
109229696
NCBI-ProteinID:
XP_019250772
UniProt:
A0A1J6IAG5
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All DBs
Position
7:110494831..110500607
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AA seq
497 aa
AA seq
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MDSKFASSAKKEVLVEIVKLAQKRQMKGSSGGWKDFLRSYDKKLGVSLSDPSKRSVDDLL
AFLKTFSQEDDIKLFKKVFQCYSNRDAVEKLQKKSPDSESAEQGLVRLTFEHPQYPTDYS
FPSHEEGWLVTRRTKKSNFVKSKKAMIAIDCEMVLCQDGTEALVRICAVDDKLEVKLNEF
VNPNKPIADYRTEITGITAGDLDGVSCSLADVQMSMKKLLSHGTILIGHSLHNDLRALKI
DHARVIDTSYVFKYQDQPSNRRPSLSNLCKSVLGFELRKKGSPHNCLDDACTAMKLVLAK
IERGVDCIVPLVREEVQEPKMAKLLVHRIPVAVHNEELHTVIPGDFTIEVKANKKGQTDK
YSAFVNFKNQQEANEAFEKLEGTQDKDSVGRPQKLVSFHLDSGISGVLCVCKMAANNLAI
EVNPMKRSSEDEETVREPKKPRIEDHCTELKEAGAGCNQCETHVTEIERLKKELIHRDEE
ISNLNKLIVNLVRKQGL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaagtttgcctcctcagcgaagaaagaggttctagtcgaaattgtcaagtta
gctcaaaagcgacagatgaaaggaagtagcggagggtggaaagattttttgagatcgtac
gacaagaagttaggtgttagcttgagtgacccgtcgaagaggtccgttgatgatttgctt
gcgtttttgaagacgtttagtcaagaggatgacattaagctttttaaaaaggtgtttcaa
tgctattccaatcgagatgctgtagagaagcttcagaaaaaatccccggatagtgaatcc
gccgaacagggactggttcgtttaacttttgagcaccctcaatatccgacagattactca
tttccatcacacgaggagggctggttagtcacgagaaggactaaaaagtctaatttcgtt
aaatcaaagaaggcaatgattgcaattgattgcgaaatggttctttgccaagatggaacc
gaagctttagtcagaatctgtgctgtggatgataagttggaggttaaactcaatgaattt
gtgaatccaaacaaaccaattgcagattacagaactgagattactggaataaccgctgga
gatttagatggagtttcttgttcattggctgatgtacagatgtccatgaaaaagctatta
tcacatggaaccatattgattgggcacagtttacacaatgaccttcgtgctttgaagata
gatcatgcaagagtgattgacacatcttatgtcttcaaatatcaagatcagccttctaat
agaagaccttctttaagtaatttgtgtaagtctgtgttaggttttgaacttcgaaagaag
ggctctccacataattgtctggatgacgcatgtactgcaatgaaacttgttcttgccaag
attgaacgtggagttgattgtatcgtaccgttagttcgtgaggaggtgcaagagcccaag
atggcaaagctacttgtccacagaataccagtggctgttcataatgaagagttacacaca
gttattcctggagactttaccatagaagttaaggctaataaaaaagggcaaacagacaag
tattctgcctttgtcaatttcaaaaatcagcaagaggcaaatgaggcatttgaaaagctt
gaaggcacccaagataaggattctgtcggacgaccacaaaagctcgtttcatttcatctt
gattccggtatatctggggttttgtgtgtttgtaagatggctgccaataacttagctata
gaggttaacccaatgaaaaggtcatctgaagatgaagagaccgtgagagagccaaagaaa
ccgagaatagaagaccattgtacagaactcaaggaggctggtgcaggttgtaatcagtgt
gaaactcacgtgacggagattgagaggctaaagaaagaattaatccacagagacgaagaa
atctccaacttgaacaaactcattgttaaccttgtgagaaaacaaggattgtaa
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