Nicotiana attenuata (coyote tobacco): 109229857
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Entry
109229857 CDS
T05870
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nau03016
]
109229857
Enzymes [BR:
nau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
109229857
Transfer RNA biogenesis [BR:
nau03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
109229857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_12
Methyltransf_31
Maf_flag10_N
Motif
Other DBs
NCBI-GeneID:
109229857
NCBI-ProteinID:
XP_019250955
UniProt:
A0A1J6ITB9
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Position
1:83624332..83627943
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AA seq
434 aa
AA seq
DB search
METHCNFWLPKKKRFCANTLLKDSQFCGNHTQRSNGQWIPCPIHPSHSVLEENLQSHLKR
CPFYKQAQSLLLQPYYQEGINAGKEQQGDQNFSSEMKRNAVHSMTLFEFSQLINKIKSVH
ASVCNDIRHSFKIPQACDIWTNRQVNRTLPFQEKHVMQQASILGNLEEFGVLKVKSETSV
DDDDDVPAVVEFGAGRGYLTQVLADCYGINKILLVERKSYKLKADRSLRQKESVTLERLR
IDIEDLKLDAVESLQGVPYLAIGKHLCGPATDMTLRCCIGEQCDDSPSESTCPMIGLAIA
TCCHHLCQWKHYINKQYMLNSGISKDDFNAMTWFTSWAVDADHGSDLSGTDWSFDLQIRE
NEHVESDLNTYQVKDMVKNMKAVDRAVVGLMCKDIIDVGRFMWLKEHRLECELVKYVLSN
ISPENRLLVARQKS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacactgcaatttctggcttccgaagaagaagagattttgcgcaaacaccctt
ctcaaagattcacagttctgcggaaaccacactcaaagatctaatggacaatggattcct
tgtcctattcacccttctcactctgtgctggaagagaatctccaaagtcaccttaagcga
tgcccattttacaaacaagctcaatctttattacttcagccttattaccaagaagggatc
aatgctggcaaagaacaacaaggggaccagaactttagttcagagatgaagagaaatgct
gttcattctatgaccctttttgaattttcccaattgatcaataaaatcaagtctgtccat
gcttctgtatgtaatgacatccgtcattctttcaagattccacaagcttgtgacatttgg
actaatcgacaagtgaaccggactttacctttccaagagaaacatgtaatgcagcaagcc
tcaattcttgggaatctagaagaatttggggttcttaaagttaagtcagaaacatcagtg
gatgatgatgatgatgttcctgcagttgttgaatttggagcagggagagggtatttgacg
caagttctggccgactgttatggaattaacaagattttattggtcgaacgcaaatcatac
aagctcaaggctgaccggagtctgcgacagaaggagagtgttactctagagcggttgaga
attgacattgaggacctaaaattggatgctgttgagagtttacaaggagttccttatctg
gcaattggtaaacatctttgtgggcctgctacagatatgactttaagatgttgtatcggg
gaacaatgtgatgattctccttcagaatcgacttgccccatgattggcctagctatagct
acatgttgtcatcatctttgtcaatggaagcattacataaataagcaatatatgttgaat
tcgggaatcagcaaggatgatttcaatgccatgacatggtttaccagctgggccgtcgat
gcagatcatgggtcagacctcagtggcactgattggtcttttgatctacagatcagggaa
aatgagcatgtagaatcagatctaaatacataccaagtcaaagacatggtgaagaatatg
aaggctgtggacagagccgttgtagggttgatgtgtaaggatattatagatgttgggagg
tttatgtggctcaaggaacatagacttgaatgtgagcttgtcaagtatgttctgtcaaat
atctctccagaaaaccgtttgttggttgctaggcagaaaagctga
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